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The map label for this gene is ysgA [H]

Identifier: 34497485

GI number: 34497485

Start: 2212099

End: 2212899

Strand: Direct

Name: ysgA [H]

Synonym: CV_2030

Alternate gene names: 34497485

Gene position: 2212099-2212899 (Clockwise)

Preceding gene: 34497484

Following gene: 34497491

Centisome position: 46.56

GC content: 69.54

Gene sequence:

>801_bases
ATGCCTTACATCTCCAAGACCATCAGCTCTCCCCACAACGACGAAGTCAAGGCGTTGGCCCGGCTGGTCCAGCACAGCCG
CGACCGCCGCAAGGAGGGCGTGATGGTGCTGGAGGGCATACACTTGGCCGAATCCTGCCTGCAGGCGGGCGGCGAGCTGT
CGCGGATCTACCTGAACGAAGCCGCGGCCGGCAAGCCCGAGGTCCGCAGGCTGCTGGACAGCCTGCCGCCCGGCAGCACG
GTGGTCTCGCTGCCCGAGGCAGTGATGTCCAAGGTGACCGCGCTGGCCAGCGCCGGAGAACTGCTGGCCCTGAGCCCGCG
CCCCAGTCCGGAAGCGCCGCCGGCGCAGGCCGCGCGGGTGATGCTGGAAGATATCCAGGACCCGGGCAATTTGGGCACCA
TCCTGCGCACCGCGGCGGCGGCGGGGGTGTATGACGTCTTCCTGTCCAAGGGCTGCGTCGACGTGTTCTCGCCCAAGGTG
CTGCGCGCCGGCATGGGCGCGCATTTCGCGCTGCGCATCCACGAGCACGCCGACCTGGCCGGCGAGCTGAGCCGGTTTGG
CGGACGCAAGCTGGTCACGCATCTGGAGGGCTCCAGCTCCTTGTACGGGCATGATCTGACGGGGCCGGTGGCCTTCGTGT
TCGGCAACGAGGGCGCCGGGGTCAGCGACGCGTTGCTGGCATTGGCCGACGCGCGCATCCGCATCCCGATGCCGGGCCAT
GCCGAATCGCTGAACGTGGCGATGGCGGCCACGGTCTGCCTGTTCGAGCGGGTGAGGCAGCTCGAGGGCCGGCGGGCCTG
A

Upstream 100 bases:

>100_bases
TCAAGGATCTGGTCAGCCGTCTGGCCCAGCATTGATGCAAGAAGGCGTCGGGGCGGGTAAACTCGGCCCCTTCGCTTCGC
GCCGCATCGACGGAACCCAT

Downstream 100 bases:

>100_bases
GATCGCGACCCGCGACCGCGGCATGGGACGTCGATTTCCTTTGGCCCGCCTGGGGCGGGCGCCGGGCATGCCCCCGAGCG
CGCGTTGCGTGCGGCCGGGC

Product: tRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPYISKTISSPHNDEVKALARLVQHSRDRRKEGVMVLEGIHLAESCLQAGGELSRIYLNEAAAGKPEVRRLLDSLPPGST
VVSLPEAVMSKVTALASAGELLALSPRPSPEAPPAQAARVMLEDIQDPGNLGTILRTAAAAGVYDVFLSKGCVDVFSPKV
LRAGMGAHFALRIHEHADLAGELSRFGGRKLVTHLEGSSSLYGHDLTGPVAFVFGNEGAGVSDALLALADARIRIPMPGH
AESLNVAMAATVCLFERVRQLEGRRA

Sequences:

>Translated_266_residues
MPYISKTISSPHNDEVKALARLVQHSRDRRKEGVMVLEGIHLAESCLQAGGELSRIYLNEAAAGKPEVRRLLDSLPPGST
VVSLPEAVMSKVTALASAGELLALSPRPSPEAPPAQAARVMLEDIQDPGNLGTILRTAAAAGVYDVFLSKGCVDVFSPKV
LRAGMGAHFALRIHEHADLAGELSRFGGRKLVTHLEGSSSLYGHDLTGPVAFVFGNEGAGVSDALLALADARIRIPMPGH
AESLNVAMAATVCLFERVRQLEGRRA
>Mature_265_residues
PYISKTISSPHNDEVKALARLVQHSRDRRKEGVMVLEGIHLAESCLQAGGELSRIYLNEAAAGKPEVRRLLDSLPPGSTV
VSLPEAVMSKVTALASAGELLALSPRPSPEAPPAQAARVMLEDIQDPGNLGTILRTAAAAGVYDVFLSKGCVDVFSPKVL
RAGMGAHFALRIHEHADLAGELSRFGGRKLVTHLEGSSSLYGHDLTGPVAFVFGNEGAGVSDALLALADARIRIPMPGHA
ESLNVAMAATVCLFERVRQLEGRRA

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI8922534, Length=319, Percent_Identity=29.7805642633229, Blast_Score=106, Evalue=3e-23,
Organism=Escherichia coli, GI1790623, Length=144, Percent_Identity=34.0277777777778, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790083, Length=146, Percent_Identity=32.1917808219178, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24666840, Length=297, Percent_Identity=26.5993265993266, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28167; Mature: 28036

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYISKTISSPHNDEVKALARLVQHSRDRRKEGVMVLEGIHLAESCLQAGGELSRIYLNE
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCEEEEEECC
AAAGKPEVRRLLDSLPPGSTVVSLPEAVMSKVTALASAGELLALSPRPSPEAPPAQAARV
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH
MLEDIQDPGNLGTILRTAAAAGVYDVFLSKGCVDVFSPKVLRAGMGAHFALRIHEHADLA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHCCCCEEEEEEHHHHHHH
GELSRFGGRKLVTHLEGSSSLYGHDLTGPVAFVFGNEGAGVSDALLALADARIRIPMPGH
HHHHHCCCHHEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEECCCCCC
AESLNVAMAATVCLFERVRQLEGRRA
CCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PYISKTISSPHNDEVKALARLVQHSRDRRKEGVMVLEGIHLAESCLQAGGELSRIYLNE
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCEEEEEECC
AAAGKPEVRRLLDSLPPGSTVVSLPEAVMSKVTALASAGELLALSPRPSPEAPPAQAARV
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH
MLEDIQDPGNLGTILRTAAAAGVYDVFLSKGCVDVFSPKVLRAGMGAHFALRIHEHADLA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHCCCCEEEEEEHHHHHHH
GELSRFGGRKLVTHLEGSSSLYGHDLTGPVAFVFGNEGAGVSDALLALADARIRIPMPGH
HHHHHCCCHHEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEECCCCCC
AESLNVAMAATVCLFERVRQLEGRRA
CCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]