Click here to switch to the map view.

The map label for this gene is ybjT [H]

Identifier: 34497488

GI number: 34497488

Start: 2215338

End: 2216279

Strand: Reverse

Name: ybjT [H]

Synonym: CV_2033

Alternate gene names: 34497488

Gene position: 2216279-2215338 (Counterclockwise)

Preceding gene: 34497489

Following gene: 34497487

Centisome position: 46.65

GC content: 69.96

Gene sequence:

>942_bases
ATGACAGCGCTGAAAATCTGCCTGATAGGCGGCAGCGGCTTCATCGGCCGCCACCTGGCCGCCCAATTGGCCAGCCGCGG
CCACCGCATCACCATCGCCAGCCGGCGGACCGGCTTGCCGGACTTCCGCGTGCTGCCGTCGGCCGAGCTGGTGTCCGCGG
ACATCCACGACCCCGGCCAGCTGGCCGGACTGATCGCCGGCCATGACGCGGTGGTCAGCATGGTCGGCATCCTGCACGGC
AGCCGGGCACAGTTCGAAAAAGCCCATGCCCAGTTGCCGGAAAAGATCGTCGACGCCTGCCGGCGCCAGGGCGTGCGCCG
CCTGGTGCATGTCAGCGCGCTGGGCGCCGCCCAGGATGCGCCCAGCGACTATCAGCAGACCAAGGCGCTGGGCGAGCTGG
CCGTGGAATCCAGCGGGCTCGACTGGACCATCCTGCGTCCGTCGGTCGTATTCGGACATGGCGACGCCTTCCTCAACATG
TTCGCCGGCCTGCAGAAACGGCTGCCGGTCCTGCCTTTGGCCGGCGCCGGTTGCAAGATGGCGCCGGTGTGGGTGGAAGA
CGTCGCCCGCGCCGTATGCGAGTGTTTGGCGCGCAAGGAAACCGAGGGCAGGAAGCTGGATCTGGCCGGACCAGAAACCT
ATACCCTGGCGCAACTGGCCCGCCTGGCCGGCCGCGCCAGCGGCCATCCGCGCCCGGTGTTCGGCCTGCCCTACGGCCTG
GCCATGCTGCAGGCGGCGCTGATGGAATGGCTGCCCGGCCCGACGCTGATGAGCCGCGACAATGTCCGTTCGCTGCAATG
GGACAATGTCAGCGACCAGCCTTTCCCCTCCGCCCTGCTGGGCTTCGAACCCGCCGCGCTGTCGGCGCTGGCGCCCGGCT
GGCTGGCCGGCCGCGACCGCAACGACACCGCGTCCCGCTACCGCGCGAAGGCGGCGCGCTGA

Upstream 100 bases:

>100_bases
TCCAGCACCTTCGGCCACGCCAATATTTCGCTGAAGAACCGCATGGGCATCGTGCCCTCGCGTTGAGGACGCCCGCCGTG
ATGAACGCAAGGAAAACGAC

Downstream 100 bases:

>100_bases
TATGGAAATCTACATCGTCGGCGGCGCCGTCCGCGACCGTCTGCTGGGCCTTCCGGTCAAGGACAGGGACTGGGTGGTGG
TCGGCTCTACTCCGGACGAG

Product: NADH-ubiquinone oxidoreductase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTALKICLIGGSGFIGRHLAAQLASRGHRITIASRRTGLPDFRVLPSAELVSADIHDPGQLAGLIAGHDAVVSMVGILHG
SRAQFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQDAPSDYQQTKALGELAVESSGLDWTILRPSVVFGHGDAFLNM
FAGLQKRLPVLPLAGAGCKMAPVWVEDVARAVCECLARKETEGRKLDLAGPETYTLAQLARLAGRASGHPRPVFGLPYGL
AMLQAALMEWLPGPTLMSRDNVRSLQWDNVSDQPFPSALLGFEPAALSALAPGWLAGRDRNDTASRYRAKAAR

Sequences:

>Translated_313_residues
MTALKICLIGGSGFIGRHLAAQLASRGHRITIASRRTGLPDFRVLPSAELVSADIHDPGQLAGLIAGHDAVVSMVGILHG
SRAQFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQDAPSDYQQTKALGELAVESSGLDWTILRPSVVFGHGDAFLNM
FAGLQKRLPVLPLAGAGCKMAPVWVEDVARAVCECLARKETEGRKLDLAGPETYTLAQLARLAGRASGHPRPVFGLPYGL
AMLQAALMEWLPGPTLMSRDNVRSLQWDNVSDQPFPSALLGFEPAALSALAPGWLAGRDRNDTASRYRAKAAR
>Mature_312_residues
TALKICLIGGSGFIGRHLAAQLASRGHRITIASRRTGLPDFRVLPSAELVSADIHDPGQLAGLIAGHDAVVSMVGILHGS
RAQFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQDAPSDYQQTKALGELAVESSGLDWTILRPSVVFGHGDAFLNMF
AGLQKRLPVLPLAGAGCKMAPVWVEDVARAVCECLARKETEGRKLDLAGPETYTLAQLARLAGRASGHPRPVFGLPYGLA
MLQAALMEWLPGPTLMSRDNVRSLQWDNVSDQPFPSALLGFEPAALSALAPGWLAGRDRNDTASRYRAKAAR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=291, Percent_Identity=25.7731958762887, Blast_Score=101, Evalue=8e-22,
Organism=Escherichia coli, GI87081793, Length=293, Percent_Identity=24.2320819112628, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17556106, Length=250, Percent_Identity=24.8, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24667554, Length=230, Percent_Identity=26.9565217391304, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33455; Mature: 33324

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALKICLIGGSGFIGRHLAAQLASRGHRITIASRRTGLPDFRVLPSAELVSADIHDPGQ
CCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCHHHHCCCCCCCHH
LAGLIAGHDAVVSMVGILHGSRAQFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQDA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSDYQQTKALGELAVESSGLDWTILRPSVVFGHGDAFLNMFAGLQKRLPVLPLAGAGCKM
CHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCHHHHHHHHHHHHCCCCCEECCCCCCC
APVWVEDVARAVCECLARKETEGRKLDLAGPETYTLAQLARLAGRASGHPRPVFGLPYGL
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
AMLQAALMEWLPGPTLMSRDNVRSLQWDNVSDQPFPSALLGFEPAALSALAPGWLAGRDR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHCCCCC
NDTASRYRAKAAR
CHHHHHHHHHCCC
>Mature Secondary Structure 
TALKICLIGGSGFIGRHLAAQLASRGHRITIASRRTGLPDFRVLPSAELVSADIHDPGQ
CEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCHHHHCCCCCCCHH
LAGLIAGHDAVVSMVGILHGSRAQFEKAHAQLPEKIVDACRRQGVRRLVHVSALGAAQDA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSDYQQTKALGELAVESSGLDWTILRPSVVFGHGDAFLNMFAGLQKRLPVLPLAGAGCKM
CHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCHHHHHHHHHHHHCCCCCEECCCCCCC
APVWVEDVARAVCECLARKETEGRKLDLAGPETYTLAQLARLAGRASGHPRPVFGLPYGL
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
AMLQAALMEWLPGPTLMSRDNVRSLQWDNVSDQPFPSALLGFEPAALSALAPGWLAGRDR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCHHCCCCC
NDTASRYRAKAAR
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]