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The map label for this gene is yraM [H]

Identifier: 34497486

GI number: 34497486

Start: 2213004

End: 2214113

Strand: Reverse

Name: yraM [H]

Synonym: CV_2031

Alternate gene names: 34497486

Gene position: 2214113-2213004 (Counterclockwise)

Preceding gene: 34497487

Following gene: 34497476

Centisome position: 46.6

GC content: 70.0

Gene sequence:

>1110_bases
ATGGACAACGGCTATCGCCTCGCCGCCACGCTGATGCGCGGCGGAACCAGCAAGGGGCTGTTCATCCGCGCGGACGCGCT
GCCCGAAGACACCGAGCTATGGCAAACCCTGCTGCTGCGCGCGATCGGCAGTCCCGATCCCTACGGACGCCAGACCGACG
GGCTGGGCAACGGCACCTCCCGCTCGACCAAGGTGGTGATCGTCAGCCCCTCCCGCCGCGACGACTGCGACGTCGACGCG
CTGTTCGGCCACGTATTCACCGACGAGGCGCGGATCGACTGGTCCGGCAACTGCGGCAACCTGGCCGCCGCCGTGCCCTT
GTTCGCGGTGATGGAAAAGCTGGCCCGGCCCGCCGACGGCGTCGCCACCATGGCCATCTGGCAGGCCAACGTCGGCAAGC
GCATCCTGGCCGATCTGGAAATCTTCGAAGGCCAGGCCGTCTGGCAGGGCGACTTCCGCATCGACGGTGTCGCCTTTCCC
GGCGCGCCGATCCGGCTGCGCTATCTGGACCCGGCGGGCGACTGCAGCGAGATGTTTCCCACCGGCTGCCTGGTCGACAA
GCTGAAGCTGCCCGACGGCAGCCAGGTGGACGCCACGCTGATAGACGCCGGCAATCCCACCCTGTTCGTGCGCGCCCGCG
ACTTCGGCCTGAGAGGCCGGGAAAAGGCCGCCGACATCGATCAGGCCATCATGCGCCGGCTGGAAATGGCCCGCGCCGCC
GCCACGGTGGCGATGGGGCTGGCCGAGGACATTTTCGCCGCCGGCCGCGAATACCCCGCCACCCCCAAGATCAGCTTCCT
GTCCACCGACGACGACCCCGGCAGCGCGCTGCACGCCCGCGCGCTTTCCATGGGCAAGCTGCATCCCGCCTATCCCGGCA
CCGACGCCATCGCCCTGGCCTGCGCCTGCGCGGCGGAAGGCACGCTGCCGGCGGAGATGGCCGGCGGCGCCGTGCGCGGC
ATGCCGCTGACCTTCAGCCACCCCAGCGGCAGGCTGACGCTGGAGGCCGTTCTGGGCCAGGACCCGCTGGGCTGGAAAGT
CGACGAGGTGGTGATGACGCGCACCGCTCGCCCGCTGATGCGCGGCGAGGTGTTCATTCCACAGGAGTGA

Upstream 100 bases:

>100_bases
TCGCCGCCGGCTGCGCCGACAAGGCCGCGATTCCGGCCACGATAGACGCCGCGCGCACCGCAGTCATCGCCAAGTGCAAG
GAGGAATGGAAGGAGGACTG

Downstream 100 bases:

>100_bases
ACCTGCCCGGCCGCACGCAACGCGCGCTCGGGGGCATGCCCGGCGCCCGCCCCAGGCGGGCCAAAGGAAATCGACGTCCC
ATGCCGCGGTCGCGGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDNGYRLAATLMRGGTSKGLFIRADALPEDTELWQTLLLRAIGSPDPYGRQTDGLGNGTSRSTKVVIVSPSRRDDCDVDA
LFGHVFTDEARIDWSGNCGNLAAAVPLFAVMEKLARPADGVATMAIWQANVGKRILADLEIFEGQAVWQGDFRIDGVAFP
GAPIRLRYLDPAGDCSEMFPTGCLVDKLKLPDGSQVDATLIDAGNPTLFVRARDFGLRGREKAADIDQAIMRRLEMARAA
ATVAMGLAEDIFAAGREYPATPKISFLSTDDDPGSALHARALSMGKLHPAYPGTDAIALACACAAEGTLPAEMAGGAVRG
MPLTFSHPSGRLTLEAVLGQDPLGWKVDEVVMTRTARPLMRGEVFIPQE

Sequences:

>Translated_369_residues
MDNGYRLAATLMRGGTSKGLFIRADALPEDTELWQTLLLRAIGSPDPYGRQTDGLGNGTSRSTKVVIVSPSRRDDCDVDA
LFGHVFTDEARIDWSGNCGNLAAAVPLFAVMEKLARPADGVATMAIWQANVGKRILADLEIFEGQAVWQGDFRIDGVAFP
GAPIRLRYLDPAGDCSEMFPTGCLVDKLKLPDGSQVDATLIDAGNPTLFVRARDFGLRGREKAADIDQAIMRRLEMARAA
ATVAMGLAEDIFAAGREYPATPKISFLSTDDDPGSALHARALSMGKLHPAYPGTDAIALACACAAEGTLPAEMAGGAVRG
MPLTFSHPSGRLTLEAVLGQDPLGWKVDEVVMTRTARPLMRGEVFIPQE
>Mature_369_residues
MDNGYRLAATLMRGGTSKGLFIRADALPEDTELWQTLLLRAIGSPDPYGRQTDGLGNGTSRSTKVVIVSPSRRDDCDVDA
LFGHVFTDEARIDWSGNCGNLAAAVPLFAVMEKLARPADGVATMAIWQANVGKRILADLEIFEGQAVWQGDFRIDGVAFP
GAPIRLRYLDPAGDCSEMFPTGCLVDKLKLPDGSQVDATLIDAGNPTLFVRARDFGLRGREKAADIDQAIMRRLEMARAA
ATVAMGLAEDIFAAGREYPATPKISFLSTDDDPGSALHARALSMGKLHPAYPGTDAIALACACAAEGTLPAEMAGGAVRG
MPLTFSHPSGRLTLEAVLGQDPLGWKVDEVVMTRTARPLMRGEVFIPQE

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhH [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=366, Percent_Identity=32.7868852459016, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 39432; Mature: 39432

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGYRLAATLMRGGTSKGLFIRADALPEDTELWQTLLLRAIGSPDPYGRQTDGLGNGTS
CCCCCEEEEHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
RSTKVVIVSPSRRDDCDVDALFGHVFTDEARIDWSGNCGNLAAAVPLFAVMEKLARPADG
CCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
VATMAIWQANVGKRILADLEIFEGQAVWQGDFRIDGVAFPGAPIRLRYLDPAGDCSEMFP
CEEEEEEECCCCHHHHHHHHEECCCEEEECCEEEEEEECCCCCEEEEEECCCCCHHHHCC
TGCLVDKLKLPDGSQVDATLIDAGNPTLFVRARDFGLRGREKAADIDQAIMRRLEMARAA
CCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
ATVAMGLAEDIFAAGREYPATPKISFLSTDDDPGSALHARALSMGKLHPAYPGTDAIALA
HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
CACAAEGTLPAEMAGGAVRGMPLTFSHPSGRLTLEAVLGQDPLGWKVDEVVMTRTARPLM
HHHHCCCCCCHHHCCCEEECCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHH
RGEVFIPQE
CCCEECCCC
>Mature Secondary Structure
MDNGYRLAATLMRGGTSKGLFIRADALPEDTELWQTLLLRAIGSPDPYGRQTDGLGNGTS
CCCCCEEEEHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
RSTKVVIVSPSRRDDCDVDALFGHVFTDEARIDWSGNCGNLAAAVPLFAVMEKLARPADG
CCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
VATMAIWQANVGKRILADLEIFEGQAVWQGDFRIDGVAFPGAPIRLRYLDPAGDCSEMFP
CEEEEEEECCCCHHHHHHHHEECCCEEEECCEEEEEEECCCCCEEEEEECCCCCHHHHCC
TGCLVDKLKLPDGSQVDATLIDAGNPTLFVRARDFGLRGREKAADIDQAIMRRLEMARAA
CCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
ATVAMGLAEDIFAAGREYPATPKISFLSTDDDPGSALHARALSMGKLHPAYPGTDAIALA
HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
CACAAEGTLPAEMAGGAVRGMPLTFSHPSGRLTLEAVLGQDPLGWKVDEVVMTRTARPLM
HHHHCCCCCCHHHCCCEEECCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHH
RGEVFIPQE
CCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9308178; 9384377 [H]