| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is hslO
Identifier: 34497455
GI number: 34497455
Start: 2179261
End: 2180145
Strand: Direct
Name: hslO
Synonym: CV_2000
Alternate gene names: 34497455
Gene position: 2179261-2180145 (Clockwise)
Preceding gene: 34497454
Following gene: 34497456
Centisome position: 45.87
GC content: 64.97
Gene sequence:
>885_bases ATGAATATGAACCATCACGACAAACTGCAACGATTCCTGTTCGACGGCGCGCCGGTGCGCGGCGCGCTGGTGCGGCTGGA CGGCGCCTGGCAACAGGTGCTGGCGCGGCGCGCTTATCCCCAGGCGCTGAAAACCGTGCTGGGCGAAATGATGGCGGCCT CGGTGCTGATGGCGGCCAACCTTAAATTCGATGGCTCGCTGATCCTGCAGATCCACGGCACCGGCGCGCTGAAACTGGCG GTGGTGGAGTGCAACAACGACCGCACCGTGCGCGCCACCGCCAAGTGGGACGGCGATCTGGACGGCAAGCCGCTGAAAGC GCTGCTGGGCGAGGGCGGCAAATTCGTGCTGACGCTGGAGCCGCGCCTGGACAAGAATCAGACCTGGCAAGGCATCGTGG CGCTGGAAGGCGACTCCGTCGGCCAGATGCTGGAAAACTACATGCTGCGCTCCGAACAGCTGGATACGGCGCTGGTGCTG GCCAGCGGCGACGAGGCCGCCGCCGGCATGCTGCTGCAGCGCCTGCCGGAAGGCCATGGCGAGGCCGAAGGCTGGGACCG CGTCCAGATGCTGGGCCGCACGCTGAAGGCTGAGGAGTTGCTGGGCCTGGGCGCCGAGGACATCCTGCACCGCCTGTTCC ACGAAGAGCAGGTGCGCGTGTTCGAGCAGGAAACCGTCAGCTTCAACTGCAACTGCTCGCGCGAACGCGTCAGCAATATG CTGACCATGCTGGGCGGCCAGGAAGTGGGCGATGTGCTGCTGGAGCAGGGCAGCGTGGAGATCGTCTGCGACTACTGCAA CCAGCGCTATGTGTTCGACGAGGAAGACGCCAATCAGTTGTTCGATTACGACGTAGTGGCGGCGGCGCGCGAAGCGCGGC ATTGA
Upstream 100 bases:
>100_bases CCGAGATCGGCGTGCGCGCCGGCTGCGAATTCGACGTCAGCTCCTCGCTGCCGATGACCGTATATACCGTTGAAGTGGCC GCCGGCGCGGCCAAGGAAGC
Downstream 100 bases:
>100_bases GGTTTGCAATTTCCATTCAAAAAAGCCGCTTATGCGGCTTTTTTTGCGTTTTCTTAAGCTGAAACAGGGCGTGAAAATTA ACTGCCTTGTTTTGTTGTTT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNMNHHDKLQRFLFDGAPVRGALVRLDGAWQQVLARRAYPQALKTVLGEMMAASVLMAANLKFDGSLILQIHGTGALKLA VVECNNDRTVRATAKWDGDLDGKPLKALLGEGGKFVLTLEPRLDKNQTWQGIVALEGDSVGQMLENYMLRSEQLDTALVL ASGDEAAAGMLLQRLPEGHGEAEGWDRVQMLGRTLKAEELLGLGAEDILHRLFHEEQVRVFEQETVSFNCNCSRERVSNM LTMLGGQEVGDVLLEQGSVEIVCDYCNQRYVFDEEDANQLFDYDVVAAAREARH
Sequences:
>Translated_294_residues MNMNHHDKLQRFLFDGAPVRGALVRLDGAWQQVLARRAYPQALKTVLGEMMAASVLMAANLKFDGSLILQIHGTGALKLA VVECNNDRTVRATAKWDGDLDGKPLKALLGEGGKFVLTLEPRLDKNQTWQGIVALEGDSVGQMLENYMLRSEQLDTALVL ASGDEAAAGMLLQRLPEGHGEAEGWDRVQMLGRTLKAEELLGLGAEDILHRLFHEEQVRVFEQETVSFNCNCSRERVSNM LTMLGGQEVGDVLLEQGSVEIVCDYCNQRYVFDEEDANQLFDYDVVAAAREARH >Mature_294_residues MNMNHHDKLQRFLFDGAPVRGALVRLDGAWQQVLARRAYPQALKTVLGEMMAASVLMAANLKFDGSLILQIHGTGALKLA VVECNNDRTVRATAKWDGDLDGKPLKALLGEGGKFVLTLEPRLDKNQTWQGIVALEGDSVGQMLENYMLRSEQLDTALVL ASGDEAAAGMLLQRLPEGHGEAEGWDRVQMLGRTLKAEELLGLGAEDILHRLFHEEQVRVFEQETVSFNCNCSRERVSNM LTMLGGQEVGDVLLEQGSVEIVCDYCNQRYVFDEEDANQLFDYDVVAAAREARH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=283, Percent_Identity=40.9893992932862, Blast_Score=231, Evalue=6e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_CHRVO (Q7NWI9)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901670.1 - ProteinModelPortal: Q7NWI9 - SMR: Q7NWI9 - GeneID: 2547569 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_2000 - NMPDR: fig|243365.1.peg.2000 - HOGENOM: HBG296531 - OMA: AMTIDQG - PhylomeDB: Q7NWI9 - ProtClustDB: PRK00114 - BioCyc: CVIO243365:CV_2000-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 - Gene3D: G3DSA:1.10.287.480 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 32616; Mature: 32616
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMNHHDKLQRFLFDGAPVRGALVRLDGAWQQVLARRAYPQALKTVLGEMMAASVLMAAN CCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC LKFDGSLILQIHGTGALKLAVVECNNDRTVRATAKWDGDLDGKPLKALLGEGGKFVLTLE CEECCEEEEEEECCCEEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEC PRLDKNQTWQGIVALEGDSVGQMLENYMLRSEQLDTALVLASGDEAAAGMLLQRLPEGHG CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCC EAEGWDRVQMLGRTLKAEELLGLGAEDILHRLFHEEQVRVFEQETVSFNCNCSRERVSNM CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH LTMLGGQEVGDVLLEQGSVEIVCDYCNQRYVFDEEDANQLFDYDVVAAAREARH HHHHCCHHHHHHHHHCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNMNHHDKLQRFLFDGAPVRGALVRLDGAWQQVLARRAYPQALKTVLGEMMAASVLMAAN CCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC LKFDGSLILQIHGTGALKLAVVECNNDRTVRATAKWDGDLDGKPLKALLGEGGKFVLTLE CEECCEEEEEEECCCEEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEC PRLDKNQTWQGIVALEGDSVGQMLENYMLRSEQLDTALVLASGDEAAAGMLLQRLPEGHG CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCC EAEGWDRVQMLGRTLKAEELLGLGAEDILHRLFHEEQVRVFEQETVSFNCNCSRERVSNM CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH LTMLGGQEVGDVLLEQGSVEIVCDYCNQRYVFDEEDANQLFDYDVVAAAREARH HHHHCCHHHHHHHHHCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782