Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34497393

Identifier: 34497393

GI number: 34497393

Start: 2109386

End: 2110801

Strand: Reverse

Name: 34497393

Synonym: CV_1938

Alternate gene names: NA

Gene position: 2110801-2109386 (Counterclockwise)

Preceding gene: 34497394

Following gene: 34497390

Centisome position: 44.43

GC content: 67.23

Gene sequence:

>1416_bases
ATGAGCATCCCCTACGACGACGTGCAAGGCACCATCCTGCGCGGTTACCGGGTGGAGCGCGCCCGGCATTTCATCCTGCG
CATCGACGACAAGGCCGGCGCGGCCGGCTTGATCCTCAAACTGGTGGACGGACAGCTGGGACTCCCGCCGATCGCCACTG
CCCAGCGCGGCCAGCAAAAACCGGTCCACTTCCTGAACCTCTGCTTCACCCGCGTCGGTTTGTCCCGGCTGGGTCTCAGC
GATGCGCAGCTGCAGACTTTCGATGCCTCGTTCTACAAGGGCGCCACGGACCCGGGCATCGCCGCCGGCATCGGGGACTG
CGACGACAGCGCCCCGGAACACTGGATAGGCGGCCTGAACGATGGCCAGCAGGTCCATGCGCTGCTCAGCCTGTGGGTGG
ACGGCGGCGAAGCGCAGCTGGAGCCGGCATCGGCCACGCTGCGCCGCGCCTTCGCCGCATCCGGCGTGACTGAGCTGTCG
GCCCAGGACGCCGTGGCGCTGCCCGACAACCGCGTCCACTTCGGCTACCGCGACAGCATCGCCCAGCCCACCATAGACGG
CGCCCCGCCGCGCAAGCGCGACGTCCCGGACGATCAGCCGGTGGTGGCCACCGGCGAATTCCTGCTCGGCTACCTCAACG
AAAGCAACGGCCGCTACACGCTGCAACCGGAAGAGCTGTCCCTCAACAGCAGCTTCGCCGCTTTCCGCATCCTGGAACAG
GACGTGCCCGGCTTCGAGCGCTTCCTGCAGACCTATGCCGCCCAGCTGGGCATGGATGCCGAAATGCTGGCGGCCAAAGT
CTGCGGCCGCTGGCGCAACGGCAATCCGTTGACGCTGATGCCAAGCGACGCCGGCGCCGCGTTGCCGCCGGACCAGCTCA
ACGCTTTCCACTATGTCAGCGATGACGTGAACCAGGACGACACGCTGGGCCTGAAGTGTCCGATCGGCTCCCACATCCGC
CGCAGCAACCCGCGCGACGGCGGCGTGGTGGGCGCCGGCAGCCCCTCGCACCGCATCGTGCGCCGCGCCATGCCTTACGG
GCCGGAATACGACCCGGCCAAGCCGGACCAGCAGAAGCGCGGCCTGATCGGCTATTTCATCAATGCCAGCCTGAGCAACC
AGTTCGAGTTCGTCACCAGCCAGTGGGCGCTGGACTCCCATTTCGTCAAATCGGCCACCGGCCCCGGCGGGTCGGAACAA
GGCAACGCGGTGTTCAACATCAGCGGAGAGGACGTGTTCCTCGGCGTCAATCACGTGGACCAAAGCTCTTTCACCGACGC
ACGGCCCGGCGCCAAGGGACACGGAAACAAGCGCATCACCGGCTTCCCCCGGTTGATCCATACCCGCGGCGGCGCCTACT
GCTTCTTCCCCAGCATCAGCGGCCTGCGCTACTTGGCGCGGCTGGCCTCCGGCTGA

Upstream 100 bases:

>100_bases
GCCACCGTGCAGACGATCCTAGCCTCCTTGCCCTAAGCGCGGCGAGCCCTCCCCGATGCGGCCGCCCGCGGCTGGCCGCA
TCCTTTTTTCCGGAGCGATC

Downstream 100 bases:

>100_bases
GGGCAAACAAAACCCCCGCGGCCCATCAGGGCGGCGGGGGCGATGATGCCAGCCGGACAGAATCAGCCGCGGATGCGGCG
CAGCACTTCTTCCTTGCCGA

Product: peroxidase

Products: oxidized donor; H2O

Alternate protein names: Dyp-Type Peroxidase Family Protein; Dyp-Type Peroxidase Family; Cytochrome; Dyp-Type Peroxidase; Iron-Dependent Peroxidase-Like Protein; Peroxidase Family Protein; Iron-Dependent Peroxidase; Peroxidase Protein; Peroxidase-Like Protein

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSIPYDDVQGTILRGYRVERARHFILRIDDKAGAAGLILKLVDGQLGLPPIATAQRGQQKPVHFLNLCFTRVGLSRLGLS
DAQLQTFDASFYKGATDPGIAAGIGDCDDSAPEHWIGGLNDGQQVHALLSLWVDGGEAQLEPASATLRRAFAASGVTELS
AQDAVALPDNRVHFGYRDSIAQPTIDGAPPRKRDVPDDQPVVATGEFLLGYLNESNGRYTLQPEELSLNSSFAAFRILEQ
DVPGFERFLQTYAAQLGMDAEMLAAKVCGRWRNGNPLTLMPSDAGAALPPDQLNAFHYVSDDVNQDDTLGLKCPIGSHIR
RSNPRDGGVVGAGSPSHRIVRRAMPYGPEYDPAKPDQQKRGLIGYFINASLSNQFEFVTSQWALDSHFVKSATGPGGSEQ
GNAVFNISGEDVFLGVNHVDQSSFTDARPGAKGHGNKRITGFPRLIHTRGGAYCFFPSISGLRYLARLASG

Sequences:

>Translated_471_residues
MSIPYDDVQGTILRGYRVERARHFILRIDDKAGAAGLILKLVDGQLGLPPIATAQRGQQKPVHFLNLCFTRVGLSRLGLS
DAQLQTFDASFYKGATDPGIAAGIGDCDDSAPEHWIGGLNDGQQVHALLSLWVDGGEAQLEPASATLRRAFAASGVTELS
AQDAVALPDNRVHFGYRDSIAQPTIDGAPPRKRDVPDDQPVVATGEFLLGYLNESNGRYTLQPEELSLNSSFAAFRILEQ
DVPGFERFLQTYAAQLGMDAEMLAAKVCGRWRNGNPLTLMPSDAGAALPPDQLNAFHYVSDDVNQDDTLGLKCPIGSHIR
RSNPRDGGVVGAGSPSHRIVRRAMPYGPEYDPAKPDQQKRGLIGYFINASLSNQFEFVTSQWALDSHFVKSATGPGGSEQ
GNAVFNISGEDVFLGVNHVDQSSFTDARPGAKGHGNKRITGFPRLIHTRGGAYCFFPSISGLRYLARLASG
>Mature_470_residues
SIPYDDVQGTILRGYRVERARHFILRIDDKAGAAGLILKLVDGQLGLPPIATAQRGQQKPVHFLNLCFTRVGLSRLGLSD
AQLQTFDASFYKGATDPGIAAGIGDCDDSAPEHWIGGLNDGQQVHALLSLWVDGGEAQLEPASATLRRAFAASGVTELSA
QDAVALPDNRVHFGYRDSIAQPTIDGAPPRKRDVPDDQPVVATGEFLLGYLNESNGRYTLQPEELSLNSSFAAFRILEQD
VPGFERFLQTYAAQLGMDAEMLAAKVCGRWRNGNPLTLMPSDAGAALPPDQLNAFHYVSDDVNQDDTLGLKCPIGSHIRR
SNPRDGGVVGAGSPSHRIVRRAMPYGPEYDPAKPDQQKRGLIGYFINASLSNQFEFVTSQWALDSHFVKSATGPGGSEQG
NAVFNISGEDVFLGVNHVDQSSFTDARPGAKGHGNKRITGFPRLIHTRGGAYCFFPSISGLRYLARLASG

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.11.1.7

Molecular weight: Translated: 50804; Mature: 50673

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPYDDVQGTILRGYRVERARHFILRIDDKAGAAGLILKLVDGQLGLPPIATAQRGQQK
CCCCCCCCCCCEECCEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHCCCCCC
PVHFLNLCFTRVGLSRLGLSDAQLQTFDASFYKGATDPGIAAGIGDCDDSAPEHWIGGLN
CHHHHHHHHHHHHHHHCCCCCCHHEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC
DGQQVHALLSLWVDGGEAQLEPASATLRRAFAASGVTELSAQDAVALPDNRVHFGYRDSI
CHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCCHHHCCCCCEECCCCCEECCHHHCC
AQPTIDGAPPRKRDVPDDQPVVATGEFLLGYLNESNGRYTLQPEELSLNSSFAAFRILEQ
CCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEEECHHHCCCCCCHHHHHHHHH
DVPGFERFLQTYAAQLGMDAEMLAAKVCGRWRNGNPLTLMPSDAGAALPPDQLNAFHYVS
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCEEEEEC
DDVNQDDTLGLKCPIGSHIRRSNPRDGGVVGAGSPSHRIVRRAMPYGPEYDPAKPDQQKR
CCCCCCCCEEEECCCCHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHC
GLIGYFINASLSNQFEFVTSQWALDSHFVKSATGPGGSEQGNAVFNISGEDVFLGVNHVD
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCC
QSSFTDARPGAKGHGNKRITGFPRLIHTRGGAYCFFPSISGLRYLARLASG
CCCCCCCCCCCCCCCCCEEECCCHHEECCCCCEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIPYDDVQGTILRGYRVERARHFILRIDDKAGAAGLILKLVDGQLGLPPIATAQRGQQK
CCCCCCCCCCEECCEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHCCCCCC
PVHFLNLCFTRVGLSRLGLSDAQLQTFDASFYKGATDPGIAAGIGDCDDSAPEHWIGGLN
CHHHHHHHHHHHHHHHCCCCCCHHEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC
DGQQVHALLSLWVDGGEAQLEPASATLRRAFAASGVTELSAQDAVALPDNRVHFGYRDSI
CHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCCHHHCCCCCEECCCCCEECCHHHCC
AQPTIDGAPPRKRDVPDDQPVVATGEFLLGYLNESNGRYTLQPEELSLNSSFAAFRILEQ
CCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEEECHHHCCCCCCHHHHHHHHH
DVPGFERFLQTYAAQLGMDAEMLAAKVCGRWRNGNPLTLMPSDAGAALPPDQLNAFHYVS
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCEEEEEC
DDVNQDDTLGLKCPIGSHIRRSNPRDGGVVGAGSPSHRIVRRAMPYGPEYDPAKPDQQKR
CCCCCCCCEEEECCCCHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHC
GLIGYFINASLSNQFEFVTSQWALDSHFVKSATGPGGSEQGNAVFNISGEDVFLGVNHVD
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCC
QSSFTDARPGAKGHGNKRITGFPRLIHTRGGAYCFFPSISGLRYLARLASG
CCCCCCCCCCCCCCCCCEEECCCHHEECCCCCEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: donor; H2O2

Specific reaction: donor + H2O2 = oxidized donor + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA