| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is folD
Identifier: 34497380
GI number: 34497380
Start: 2095095
End: 2095946
Strand: Direct
Name: folD
Synonym: CV_1925
Alternate gene names: 34497380
Gene position: 2095095-2095946 (Clockwise)
Preceding gene: 34497379
Following gene: 34497381
Centisome position: 44.1
GC content: 65.14
Gene sequence:
>852_bases ATGTCGGCACAATTGATCGATGGCAAGGCGGTAGCGGAAAAACTGCTGGAAAAGGTAAGCGCGGGCGTGGGCGAGCGGTT GGCCCAAGGCAAGCGGGCGCCGGCGCTGGCGGTGATCCTGGTCGGCGATAATCCGGCCTCCGCGGTTTACGTGGGCAGCA AGAAGAAGGCTTGCGAAAAGGCGGGCATTCGTTCCGTGGCCTATGACCTGCCGGCGTCCACCAGCCAGCAGCAGCTGCTG GAAATCATCGACGGCCTGAATGCGGACGACGCCGTGGACGGCATCCTGGTGCAATTGCCGCTGCCGGAGCAGATCGACCC GCAGGCGGTGATCGAGCGCATCGATCCGAAAAAGGACGTGGACGGCTTCCACCCTTATAATGTCGGCCGGCTGGCGATCA AGATGCCGCTGATGCGGCCGTGCACGCCGCGCGGCGTGATGACGCTGCTGGAAGAATACGGCATCGATCCCAAGGGCAAA AAGGCAGTGATCGTCGGCGCGTCCAACATCGTCGGCCGCCCGCAGGCGCTGGAGATGCTGCTGGCGCGAGCCACCGTCAC CGTTTGCCACAGCGCCACGCGCAATCTGGCGGAGGAGGTGGCCGCCGCCGACATCCTGGTGGTGGGCGTGGGCATTCCCA ACTTCGTCAAGGGCGAGTGGGTCAAGCCGGGCGCGGTGGTGATCGACGTGGGCATCAACCGGCTGGATACCGGCAAGCTG TGCGGCGACGTGGAATTCGACGCGGCGCGCGAACGCGCCGGCTTCATTACCCCGGTGCCGGGCGGCGTGGGGCCGATGAC GGTGGCGACCTTGTTGCAGAATACGCTGGATTCCGCCAATCTGAACGCCTGA
Upstream 100 bases:
>100_bases TGATCTTAAGAAAAATAATCGGCGGAGCGCTCTTACTGCGCTGCGCGATTAATGCGAGAATAGCGGCCGTTATTTACCTG CATCAATATGGGAATCAGGC
Downstream 100 bases:
>100_bases GCAGGACGCCGCGTTCGCGCGGCGGCCGCAGCCAAGCTCGCCACAGCGGCGCGACGCGCCTGGCTGTGGCGATTTTGTTT TCCGCGGCGGCGGCCTGGTC
Product: methylenetetrahydrofolate dehydrogenase/cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSAQLIDGKAVAEKLLEKVSAGVGERLAQGKRAPALAVILVGDNPASAVYVGSKKKACEKAGIRSVAYDLPASTSQQQLL EIIDGLNADDAVDGILVQLPLPEQIDPQAVIERIDPKKDVDGFHPYNVGRLAIKMPLMRPCTPRGVMTLLEEYGIDPKGK KAVIVGASNIVGRPQALEMLLARATVTVCHSATRNLAEEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDTGKL CGDVEFDAARERAGFITPVPGGVGPMTVATLLQNTLDSANLNA
Sequences:
>Translated_283_residues MSAQLIDGKAVAEKLLEKVSAGVGERLAQGKRAPALAVILVGDNPASAVYVGSKKKACEKAGIRSVAYDLPASTSQQQLL EIIDGLNADDAVDGILVQLPLPEQIDPQAVIERIDPKKDVDGFHPYNVGRLAIKMPLMRPCTPRGVMTLLEEYGIDPKGK KAVIVGASNIVGRPQALEMLLARATVTVCHSATRNLAEEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDTGKL CGDVEFDAARERAGFITPVPGGVGPMTVATLLQNTLDSANLNA >Mature_282_residues SAQLIDGKAVAEKLLEKVSAGVGERLAQGKRAPALAVILVGDNPASAVYVGSKKKACEKAGIRSVAYDLPASTSQQQLLE IIDGLNADDAVDGILVQLPLPEQIDPQAVIERIDPKKDVDGFHPYNVGRLAIKMPLMRPCTPRGVMTLLEEYGIDPKGKK AVIVGASNIVGRPQALEMLLARATVTVCHSATRNLAEEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDTGKLC GDVEFDAARERAGFITPVPGGVGPMTVATLLQNTLDSANLNA
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=288, Percent_Identity=44.7916666666667, Blast_Score=231, Evalue=5e-61, Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=45.9183673469388, Blast_Score=224, Evalue=5e-59, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=45.0847457627119, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI36796743, Length=213, Percent_Identity=28.6384976525822, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=60.9318996415771, Blast_Score=357, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17568735, Length=291, Percent_Identity=43.9862542955326, Blast_Score=216, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6319558, Length=285, Percent_Identity=46.3157894736842, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=43.9597315436242, Blast_Score=229, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6322933, Length=313, Percent_Identity=27.4760383386581, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI17136816, Length=293, Percent_Identity=47.7815699658703, Blast_Score=241, Evalue=4e-64, Organism=Drosophila melanogaster, GI17136818, Length=293, Percent_Identity=47.7815699658703, Blast_Score=240, Evalue=6e-64, Organism=Drosophila melanogaster, GI62472483, Length=287, Percent_Identity=45.993031358885, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551871, Length=287, Percent_Identity=45.993031358885, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI24645718, Length=287, Percent_Identity=45.993031358885, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI17137370, Length=287, Percent_Identity=45.993031358885, Blast_Score=226, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_CHRVO (Q7NWQ6)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901595.1 - HSSP: P11586 - ProteinModelPortal: Q7NWQ6 - SMR: Q7NWQ6 - GeneID: 2548915 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1925 - NMPDR: fig|243365.1.peg.1925 - HOGENOM: HBG328751 - OMA: DVVYETA - PhylomeDB: Q7NWQ6 - BioCyc: CVIO243365:CV_1925-MONOMER - BRENDA: 1.5.1.5 - BRENDA: 3.5.4.9 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 29697; Mature: 29566
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQLIDGKAVAEKLLEKVSAGVGERLAQGKRAPALAVILVGDNPASAVYVGSKKKACEK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCHHHHHH AGIRSVAYDLPASTSQQQLLEIIDGLNADDAVDGILVQLPLPEQIDPQAVIERIDPKKDV HCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCC DGFHPYNVGRLAIKMPLMRPCTPRGVMTLLEEYGIDPKGKKAVIVGASNIVGRPQALEML CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH LARATVTVCHSATRNLAEEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDTGKL HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC CGDVEFDAARERAGFITPVPGGVGPMTVATLLQNTLDSANLNA CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAQLIDGKAVAEKLLEKVSAGVGERLAQGKRAPALAVILVGDNPASAVYVGSKKKACEK CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCHHHHHH AGIRSVAYDLPASTSQQQLLEIIDGLNADDAVDGILVQLPLPEQIDPQAVIERIDPKKDV HCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCC DGFHPYNVGRLAIKMPLMRPCTPRGVMTLLEEYGIDPKGKKAVIVGASNIVGRPQALEML CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH LARATVTVCHSATRNLAEEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDTGKL HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC CGDVEFDAARERAGFITPVPGGVGPMTVATLLQNTLDSANLNA CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782