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The map label for this gene is yeeY [H]

Identifier: 34497376

GI number: 34497376

Start: 2091429

End: 2092328

Strand: Direct

Name: yeeY [H]

Synonym: CV_1921

Alternate gene names: 34497376

Gene position: 2091429-2092328 (Clockwise)

Preceding gene: 34497374

Following gene: 34497379

Centisome position: 44.02

GC content: 71.22

Gene sequence:

>900_bases
ATGAAAACCACGCTGGAACAGTGGCAGGTGCTGCGCGCGATCGTGGAAGAGGGCGGCTTTGCCCAGGCCGCGGAGACGCT
GCATCGCAGCCAGTCCGCGGTCAGCTACGCGGTGGCCAGACTGCAGGAGCAGCTGGGCGTGGCCTTGCTGCGCCAGGAGG
GGCGGCGGATGCGGTTGACCGTCGAAGGCGAGGTATTGCTGCGCGAGGCTGGCGAACTGCTGCGTCAGGCCGACAGCTTG
GAGCGGCGCGCGGGCAGTCTGCGACGGGGCTGGGAGCCGGAGCTCAAGGTGGCGATGGACAGCCTGCTGCCTGTCGAGGT
GGTGCTGGCCGCCTGCGGCGATTTTGCCGGCCACTGTCGCGAGACGCGGCTGCGACTGCACGAGGTGGTGATGTCAGGCG
CCGACGACGCCTTATACCAGGGCGATGCCGCATTGGCGGTGGCGGGACGGGTGCCGCAAGGGTTCCTGGGCGATTGGCTG
CTGGATGCGGAATTCATCGCCTGCGCCGCGCCGGGCCACCGCCTGCACGCGCTGGGCGGCGAGCTGGACGGCGAAAAGCT
GCGCGGCGAGGTGCAGGTGGTGCTGCGGGATACCGGCATCCGCCAGCCGCGCGACGAAGGCTGGTTGGGCGCGCGCCAGC
GCTGGACGGTGTCGCAGCCGGAAACCGGCATCGCGATGGTGGAGGCGGGGCTGGCCTTCGGCTGGCTGGCGCGCCACCGC
ATCCGGCGGCAGCTGGCCGAGGGCAGCCTGAAGCCCTTGCCGCTGAAAAGCGGGGCGGTGCGCAAGGCGTCGTTGTACCT
GGTGCTGGCGGAACCGTCGTCCGCCGGACCCGCCTGCCTGTATCTGGCGGACGCCTTGAGGCGGGCGGCCGCCGACTGGC
GCAGCGGCTGCGCTCAGTGA

Upstream 100 bases:

>100_bases
TCTCCTGTCTGAATGCATGCCGCCATTCTTGCAGTGAAAAACCAGATAAAAAAGCGCAAAATTCAGCTTATATTCATCAG
AAAAACTGATTGGTTGGCTA

Downstream 100 bases:

>100_bases
TTGGCCTGCTGGCCCTTCAGGTAGCTTTCCAGCGCGTGGCCGGCCGACAGGATGTGGAAGCGCAGGAATTCCGCCGCTTC
GTCCGCCTTGCCCTGGCGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKTTLEQWQVLRAIVEEGGFAQAAETLHRSQSAVSYAVARLQEQLGVALLRQEGRRMRLTVEGEVLLREAGELLRQADSL
ERRAGSLRRGWEPELKVAMDSLLPVEVVLAACGDFAGHCRETRLRLHEVVMSGADDALYQGDAALAVAGRVPQGFLGDWL
LDAEFIACAAPGHRLHALGGELDGEKLRGEVQVVLRDTGIRQPRDEGWLGARQRWTVSQPETGIAMVEAGLAFGWLARHR
IRRQLAEGSLKPLPLKSGAVRKASLYLVLAEPSSAGPACLYLADALRRAAADWRSGCAQ

Sequences:

>Translated_299_residues
MKTTLEQWQVLRAIVEEGGFAQAAETLHRSQSAVSYAVARLQEQLGVALLRQEGRRMRLTVEGEVLLREAGELLRQADSL
ERRAGSLRRGWEPELKVAMDSLLPVEVVLAACGDFAGHCRETRLRLHEVVMSGADDALYQGDAALAVAGRVPQGFLGDWL
LDAEFIACAAPGHRLHALGGELDGEKLRGEVQVVLRDTGIRQPRDEGWLGARQRWTVSQPETGIAMVEAGLAFGWLARHR
IRRQLAEGSLKPLPLKSGAVRKASLYLVLAEPSSAGPACLYLADALRRAAADWRSGCAQ
>Mature_299_residues
MKTTLEQWQVLRAIVEEGGFAQAAETLHRSQSAVSYAVARLQEQLGVALLRQEGRRMRLTVEGEVLLREAGELLRQADSL
ERRAGSLRRGWEPELKVAMDSLLPVEVVLAACGDFAGHCRETRLRLHEVVMSGADDALYQGDAALAVAGRVPQGFLGDWL
LDAEFIACAAPGHRLHALGGELDGEKLRGEVQVVLRDTGIRQPRDEGWLGARQRWTVSQPETGIAMVEAGLAFGWLARHR
IRRQLAEGSLKPLPLKSGAVRKASLYLVLAEPSSAGPACLYLADALRRAAADWRSGCAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=260, Percent_Identity=31.5384615384615, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787949, Length=256, Percent_Identity=28.515625, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789492, Length=256, Percent_Identity=31.640625, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786713, Length=240, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082132, Length=147, Percent_Identity=31.9727891156463, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1786401, Length=76, Percent_Identity=42.1052631578947, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32626; Mature: 32626

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLEQWQVLRAIVEEGGFAQAAETLHRSQSAVSYAVARLQEQLGVALLRQEGRRMRLT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VEGEVLLREAGELLRQADSLERRAGSLRRGWEPELKVAMDSLLPVEVVLAACGDFAGHCR
ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETRLRLHEVVMSGADDALYQGDAALAVAGRVPQGFLGDWLLDAEFIACAAPGHRLHALGG
HHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHEECCCCCEEECCCC
ELDGEKLRGEVQVVLRDTGIRQPRDEGWLGARQRWTVSQPETGIAMVEAGLAFGWLARHR
CCCCHHHCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IRRQLAEGSLKPLPLKSGAVRKASLYLVLAEPSSAGPACLYLADALRRAAADWRSGCAQ
HHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTTLEQWQVLRAIVEEGGFAQAAETLHRSQSAVSYAVARLQEQLGVALLRQEGRRMRLT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VEGEVLLREAGELLRQADSLERRAGSLRRGWEPELKVAMDSLLPVEVVLAACGDFAGHCR
ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETRLRLHEVVMSGADDALYQGDAALAVAGRVPQGFLGDWLLDAEFIACAAPGHRLHALGG
HHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHEECCCCCEEECCCC
ELDGEKLRGEVQVVLRDTGIRQPRDEGWLGARQRWTVSQPETGIAMVEAGLAFGWLARHR
CCCCHHHCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IRRQLAEGSLKPLPLKSGAVRKASLYLVLAEPSSAGPACLYLADALRRAAADWRSGCAQ
HHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]