| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is eamB [H]
Identifier: 34497356
GI number: 34497356
Start: 2067224
End: 2067844
Strand: Direct
Name: eamB [H]
Synonym: CV_1901
Alternate gene names: 34497356
Gene position: 2067224-2067844 (Clockwise)
Preceding gene: 34497351
Following gene: 34497357
Centisome position: 43.51
GC content: 68.12
Gene sequence:
>621_bases ATGCCGGAATTCGCTTTGCTGTCCTATGTCGCCCTGATGTCGATCACGCCGGGGCCCAATAACCTGATGCTGGCCTCGTC CGGCGTCAATTTCGGCTTCCGCCGCACCGTGCCGCACATGCTGGGCATCAGCCTGGGCTGCGCGCTGCAGGTGTTCATCG TGGCCATGCTGCTGGCGCAGATGCTGGGCTGGCTGTCGTCGTGGCGCCTGCCGCTGGCGGTGGCCGGCTGCGTCTACCTG TTGTGGCTGTCGTGGCAGATCGCCCGTTCCGGCCAGCCGGAAGCGCGCGAGCAGGCCCGGCCGCTGGGCTTCATCGGCGC GGCGCTGTTCCAGTGGCTGAATCCCAAGGCCTGGGTGATGGTGCTGAACGCGTCCATCCTGTTCATGCCGGCTGGCGAGG GCGGGCGCTGGCTGGCGGCGCTGTTGCTGGCGCTGGTGTTCGCCGTGGTCAACCTGCCCTGCATCAGCGTGTGGGCCTGG GGCGGCGAGAAACTGCGGCGCTCGCTGTCCGCGCCCCGCGCCTTGCTGCTCTACAACCTGACGATGGGCGCGCTGATGGC CGTCACCGCGCTATGGCTGCTCTATGACGAACTGGCACCGGCGCTTGCCCTGACGGCATGA
Upstream 100 bases:
>100_bases AATAATGGATTTTTGAATCTGTATCCATCAAGACAGTCCGCTTAGCATGTCCGGGTGGGCAAGGGCCTGTCGCCGCTTGC CGTTTCGCAGGAGATCCTCG
Downstream 100 bases:
>100_bases TGTCCTTTTCTGGCAGGGGCTTGTCCGGAGATGGCCTTATTTGCTGGCCATATCCGCCATACGATGCTGTCCATATCCAC ACCGCCGGGGGAGGCGAAAT
Product: transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPEFALLSYVALMSITPGPNNLMLASSGVNFGFRRTVPHMLGISLGCALQVFIVAMLLAQMLGWLSSWRLPLAVAGCVYL LWLSWQIARSGQPEAREQARPLGFIGAALFQWLNPKAWVMVLNASILFMPAGEGGRWLAALLLALVFAVVNLPCISVWAW GGEKLRRSLSAPRALLLYNLTMGALMAVTALWLLYDELAPALALTA
Sequences:
>Translated_206_residues MPEFALLSYVALMSITPGPNNLMLASSGVNFGFRRTVPHMLGISLGCALQVFIVAMLLAQMLGWLSSWRLPLAVAGCVYL LWLSWQIARSGQPEAREQARPLGFIGAALFQWLNPKAWVMVLNASILFMPAGEGGRWLAALLLALVFAVVNLPCISVWAW GGEKLRRSLSAPRALLLYNLTMGALMAVTALWLLYDELAPALALTA >Mature_205_residues PEFALLSYVALMSITPGPNNLMLASSGVNFGFRRTVPHMLGISLGCALQVFIVAMLLAQMLGWLSSWRLPLAVAGCVYLL WLSWQIARSGQPEAREQARPLGFIGAALFQWLNPKAWVMVLNASILFMPAGEGGRWLAALLLALVFAVVNLPCISVWAWG GEKLRRSLSAPRALLLYNLTMGALMAVTALWLLYDELAPALALTA
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=168, Percent_Identity=30.952380952381, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 22412; Mature: 22281
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEFALLSYVALMSITPGPNNLMLASSGVNFGFRRTVPHMLGISLGCALQVFIVAMLLAQ CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGWLSSWRLPLAVAGCVYLLWLSWQIARSGQPEAREQARPLGFIGAALFQWLNPKAWVM HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEE VLNASILFMPAGEGGRWLAALLLALVFAVVNLPCISVWAWGGEKLRRSLSAPRALLLYNL EEECEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHCCCHHHHHHHH TMGALMAVTALWLLYDELAPALALTA HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEFALLSYVALMSITPGPNNLMLASSGVNFGFRRTVPHMLGISLGCALQVFIVAMLLAQ CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGWLSSWRLPLAVAGCVYLLWLSWQIARSGQPEAREQARPLGFIGAALFQWLNPKAWVM HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEE VLNASILFMPAGEGGRWLAALLLALVFAVVNLPCISVWAWGGEKLRRSLSAPRALLLYNL EEECEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHCCCHHHHHHHH TMGALMAVTALWLLYDELAPALALTA HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA