Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497308

Identifier: 34497308

GI number: 34497308

Start: 2008431

End: 2009885

Strand: Direct

Name: 34497308

Synonym: CV_1853

Alternate gene names: NA

Gene position: 2008431-2009885 (Clockwise)

Preceding gene: 34497304

Following gene: 34497310

Centisome position: 42.27

GC content: 68.25

Gene sequence:

>1455_bases
CTGCTGCAGCTGGCCGAGCTGGCCGGCGTCGCCGTCGCCCAGCACGATGGACATCAGCGCGTCCTGCTCGCCGGGCGCGA
TCAGGTCCAGCACCGACTGGCCGGGCAGCATGCAGGGCGGGAAGCCGAAAATGCGTTCGGCGACGGCGTTGGCGGTCACG
ATGAAGCCAGTGCGGTCCAGCGTCACGATGCCGTCTATCGAGGTGTCGATCACCGCGGCCAGTTGCGCCTGCTGTTGGGC
CAGCTGGCGGTCGGCGCGCTGCAGCGCCTGCTGATCCTGGTTGGCGAGGATCAGCTGGCTCAGCGTGTTCATCAGCACCG
GCGGGATGGCGTCGGCCGGCGTCGGCCGCGCCACCGGCGACAGGAACAGCGTGAACGAGCCGATCACCCGGCTGGCGTGC
AGAATGGGCAGCGTGAGGAAGTCGCAGTCGTCGCGGAAGGGGCCGCGCGCGCCCTGCTGCAGATGCAGCAGCCGCTCCTG
GGTCTCGGTCACGGCGATGCGCAGGATATCGTCGCGCGGCAACTCCACCGGCGGGCATTGCGGGGGCGTCAGCGGCAGCA
GCAAGGGTTCGCCGTCGCGTTCGCGCAGCTCGCACAGGAAACCGTGCTCGGCTTCGAAATGCAGCAGCAGGATGTCGCGC
GCGTAGCAGAACAGCGTGCCGGCGGGCAGCTTGCTGATGAACAGGCTTTGCAGATAGTTGATGGCGTCCAGCAGCTTCTC
GTTGCGGCGCAGCCGGACGCCGGCGGCGGCCGAGTCGGCCAGCGCCTCCTGCATGCGTTCGTAGTTGCCGGCCAACTGCG
TCGACATGCTGTTGAACATGCGCGCGGTGCGGGCGAGCTCGTCGTTGCCCAGCAGCGGTATCTGGTAGCCGATGTCGCCA
TCGGCCATGCGCTTGGCCGCTTGCTGCAGCGCGTTCAGCTGACGGGTCAGGTAAATGCCCAGCGCGATGGAGAACAGCGC
GGAAAGCAGCAGTTCGGCTACCGCCAGCAGCAGGCCGTCCTGGCGCGCCTGCGCCATCAACTGCCGGTGGGCGGCAGCGG
AGTCGCCGAGCTCGACCTGGCCGTAACGGATGCCGCCGACGGTGATGTCGTGGGTGACGGCGAACAGCTGGCCGTTTTCC
AGCTGTTCCGGCGTGGGGCTCGGCGGCCGCAAGGCCGCCAGCGCGGCGGGATCGCCGGCCTCGGCCAGCACCCGGTCCCG
ATTGTCCCGAACCCTGGCGTAGACCACGCTGTTGGAGGCCACCATCTGCTGGACGGCGCTGCGCAGGGTGGCCAGGTCGG
TGCTGAGCACGGCGTTCTGGTTGGCCTGGGCGAACAGCTCGGCGATGATCTGGCTGCGCTTGAGCAGTTCCCGGGCGCTG
GTGTCGTGCAGCAGCGCCAGGCCGAAATGCAGCAGCAGACCGAGCATGATCATCTCGATCAGCGCGATCCCCAATATGGT
TTTCAGCCGGAATGA

Upstream 100 bases:

>100_bases
CGCGCAGCGTCATGTTGAAGCCGATGCCATCCAGCTCAGGCATGCGGGTGATGGCCATCTCCAGCGGGAACAGGCTGCCG
TCGGCGCGCGCGGCGGTCAG

Downstream 100 bases:

>100_bases
CATTGTTCAGCGCTCCACCGGCGGCTGGTAGCGCAGCTTGAGGCGGCGGATGTCGTTCCAGTCGCTATCCTGCGCCTCGG
TCAGCGGCGTCAGCTGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQRHDAVYRGVDHRGQLRLLLG
QLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRRQEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLL
GLGHGDAQDIVARQLHRRALRGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL
VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGRLLQRVQLTGQVNAQRDGEQR
GKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAADGDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVP
IVPNPGVDHAVGGHHLLDGAAQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG
FQPE

Sequences:

>Translated_484_residues
MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQRHDAVYRGVDHRGQLRLLLG
QLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRRQEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLL
GLGHGDAQDIVARQLHRRALRGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL
VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGRLLQRVQLTGQVNAQRDGEQR
GKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAADGDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVP
IVPNPGVDHAVGGHHLLDGAAQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG
FQPE
>Mature_484_residues
MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQRHDAVYRGVDHRGQLRLLLG
QLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRRQEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLL
GLGHGDAQDIVARQLHRRALRGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL
VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGRLLQRVQLTGQVNAQRDGEQR
GKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAADGDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVP
IVPNPGVDHAVGGHHLLDGAAQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG
FQPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52269; Mature: 52269

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQ
CCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHH
RHDAVYRGVDHRGQLRLLLGQLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH
QEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLLGLGHGDAQDIVARQLHRRAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGR
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
LLQRVQLTGQVNAQRDGEQRGKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAAD
HHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC
GDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVPIVPNPGVDHAVGGHHLLDGA
CCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
AQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG
CCCCCCCCCCCEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FQPE
CCCC
>Mature Secondary Structure
MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQ
CCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHH
RHDAVYRGVDHRGQLRLLLGQLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH
QEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLLGLGHGDAQDIVARQLHRRAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGR
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
LLQRVQLTGQVNAQRDGEQRGKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAAD
HHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC
GDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVPIVPNPGVDHAVGGHHLLDGA
CCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
AQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG
CCCCCCCCCCCEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FQPE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA