Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497294

Identifier: 34497294

GI number: 34497294

Start: 1994843

End: 1995415

Strand: Reverse

Name: 34497294

Synonym: CV_1839

Alternate gene names: NA

Gene position: 1995415-1994843 (Counterclockwise)

Preceding gene: 34497295

Following gene: 34497292

Centisome position: 42.0

GC content: 71.38

Gene sequence:

>573_bases
ATGCGACAAGCGATCGCCACGTTGCAACAACTGTACCGCGAGCACGGCGCGCGCCATTACGGCGAGGCCGTCAGCCAGTT
CGACCACGCGATCCAGGCCGCCACGCTGGCGCGCGACGCCGGCTGCGACGATGAACTGACGCTGGCCGCCTTCCTGCACG
ACGTCGGCCACCTGCTGGAGCACGACGGCGCTCAGGCCATGGGCGGCTACGGCGTGATGGCCCACGACAAGCTGGCGCGG
GATTACTTGCTGCAGCAGGGTTTCTCGCCCCGGCTGGCGCGGCTGGTCGGCATGCACGTCGAAGCCAAGCGCTACCTGTG
CTCGGTCGATCCGGCGTATCTGGCGGCGCTGTCGCCGGCCAGCGCCGCCACGCTGGGCTACCAGGGCGGACCGATGCGCG
CGGACGAGGCCGACGCGTTCTCGCGGCTGCCGGACCTGGCCGACATCCTGGCGCTGAGGAGGCTGGACGAGGCGGCCAAA
GACGGCGGCTGGAGCCTGGACGCGGCCGATTGGGTGTGGCCGCTGATGGCGGCGCACCTGGGCAGCCAGCGTCCCGCCGC
TTGGCCCGCTTGA

Upstream 100 bases:

>100_bases
ACATCGCCGTCGGCCAGCGCGCCGATCTGGTGGCCATGATCGTTCATGGCGACGTGCCGCTGGTGCGGCAAGTCTGGAAC
AGCGGCAGGAGGGTATTCTG

Downstream 100 bases:

>100_bases
AGCCTCACCATGCCAGCGGCCCCTTCTCGCCGTTGGCGTGCTCGCCGTAATACAAGGACGGCAAGAAGCGCGCCAGGCTG
CTGAACTCGTTGTAACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRQAIATLQQLYREHGARHYGEAVSQFDHAIQAATLARDAGCDDELTLAAFLHDVGHLLEHDGAQAMGGYGVMAHDKLAR
DYLLQQGFSPRLARLVGMHVEAKRYLCSVDPAYLAALSPASAATLGYQGGPMRADEADAFSRLPDLADILALRRLDEAAK
DGGWSLDAADWVWPLMAAHLGSQRPAAWPA

Sequences:

>Translated_190_residues
MRQAIATLQQLYREHGARHYGEAVSQFDHAIQAATLARDAGCDDELTLAAFLHDVGHLLEHDGAQAMGGYGVMAHDKLAR
DYLLQQGFSPRLARLVGMHVEAKRYLCSVDPAYLAALSPASAATLGYQGGPMRADEADAFSRLPDLADILALRRLDEAAK
DGGWSLDAADWVWPLMAAHLGSQRPAAWPA
>Mature_190_residues
MRQAIATLQQLYREHGARHYGEAVSQFDHAIQAATLARDAGCDDELTLAAFLHDVGHLLEHDGAQAMGGYGVMAHDKLAR
DYLLQQGFSPRLARLVGMHVEAKRYLCSVDPAYLAALSPASAATLGYQGGPMRADEADAFSRLPDLADILALRRLDEAAK
DGGWSLDAADWVWPLMAAHLGSQRPAAWPA

Specific function: Unknown

COG id: COG4341

COG function: function code R; Predicted HD phosphohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20561; Mature: 20561

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQAIATLQQLYREHGARHYGEAVSQFDHAIQAATLARDAGCDDELTLAAFLHDVGHLLE
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HDGAQAMGGYGVMAHDKLARDYLLQQGFSPRLARLVGMHVEAKRYLCSVDPAYLAALSPA
CCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
SAATLGYQGGPMRADEADAFSRLPDLADILALRRLDEAAKDGGWSLDAADWVWPLMAAHL
HHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GSQRPAAWPA
CCCCCCCCCC
>Mature Secondary Structure
MRQAIATLQQLYREHGARHYGEAVSQFDHAIQAATLARDAGCDDELTLAAFLHDVGHLLE
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HDGAQAMGGYGVMAHDKLARDYLLQQGFSPRLARLVGMHVEAKRYLCSVDPAYLAALSPA
CCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
SAATLGYQGGPMRADEADAFSRLPDLADILALRRLDEAAKDGGWSLDAADWVWPLMAAHL
HHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GSQRPAAWPA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA