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The map label for this gene is motB1 [H]

Identifier: 34497269

GI number: 34497269

Start: 1971520

End: 1972353

Strand: Reverse

Name: motB1 [H]

Synonym: CV_1814

Alternate gene names: 34497269

Gene position: 1972353-1971520 (Counterclockwise)

Preceding gene: 34497270

Following gene: 34497268

Centisome position: 41.51

GC content: 65.71

Gene sequence:

>834_bases
ATGGCATCGCGACGCAGGAAGCAGGAAGAAGAGCACGAGAACCACGAGCGCTGGCTGGTTTCCTACGCCGACTTCATCAC
GCTGCTGTTCGCCTTCTTCGTGGTGATGTACGCGATCTCGTCGCTGAACGAGGGCAAGTACCGGGTGATGTCTTCCGCCA
TCATGGACGCCTTCCGCAGCGGCACGACGATCACGGTGCAGACCACGCCGCCCACCGGCGGCGCCAACACCATGATAGAA
ATTCCGCAGACCAAGCCGATCGCCAAGTCCACCGCCCGCAACCGCAAAGCCGAGGAAGCGGCCAAGCTGGGCCAGCTGAC
GCAGAACCTGGCCAAGGCGCTGAGCCCGCTGGTGCAGAGCGGCGAAGTCACCATCACCCAAAGCAACCAGGGCATCCATA
TCGACATCCGCGACAGCGCGCTGTTCGCCGTCGGACAGGCCGTCCCCAACCAGCAGTCGATGCCGCTGATGTCCAATATG
GCCAAACTGCTGGCCGGCGTCGACAACGCGATCAAGGTGGAAGGCTTCACCGACGACGCGCCGATCCGCACGCCGGTGTT
CCCATCCAACTGGGAGCTGTCCGCCGCCCGCGCCGGCGGCGTGGTGCGCCTGTTCCAGGAAAGCGGCGTCGATCCCCAGC
GCCTGGTCGCCGTCGGCCACGGCGCCAACCAGCCGGTGGCAGACAACGCCACCGCGGACGGCCGCGCGCGCAATCGCCGC
GTCACCATTTCCGTCCAGGCGAATACCTTCGAGGAACCTGCCGCCGAAAACGCCGCCCCTGCCGCCAAGGCGCCAGGCAA
CCATACCCCCACCCCAACCGAGGTAAGACCATGA

Upstream 100 bases:

>100_bases
CGACTTCTCCAGCCGAGTGGCTCGCCGCATCGGCGTGGAGTTCGCCGGCGGCGTGAAGTCGCTGTTCGACGCCAAACTGT
TCTGACACGCGGAGGCGGAC

Downstream 100 bases:

>100_bases
GCACTCCCCTCTCCCACGCCACGCTGGAACAGCTGTTCCTGAACGCCCGCACCCACAGCCACTGGCAACCGCGTCCGGTG
AGCGACGAGCTGCTGCACCA

Product: flagellar motor protein MotD

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MASRRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAFRSGTTITVQTTPPTGGANTMIE
IPQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQSGEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPLMSNM
AKLLAGVDNAIKVEGFTDDAPIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAVGHGANQPVADNATADGRARNRR
VTISVQANTFEEPAAENAAPAAKAPGNHTPTPTEVRP

Sequences:

>Translated_277_residues
MASRRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAFRSGTTITVQTTPPTGGANTMIE
IPQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQSGEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPLMSNM
AKLLAGVDNAIKVEGFTDDAPIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAVGHGANQPVADNATADGRARNRR
VTISVQANTFEEPAAENAAPAAKAPGNHTPTPTEVRP
>Mature_276_residues
ASRRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAFRSGTTITVQTTPPTGGANTMIEI
PQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQSGEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPLMSNMA
KLLAGVDNAIKVEGFTDDAPIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAVGHGANQPVADNATADGRARNRRV
TISVQANTFEEPAAENAAPAAKAPGNHTPTPTEVRP

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=296, Percent_Identity=28.3783783783784, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 29860; Mature: 29729

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAFRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GTTITVQTTPPTGGANTMIEIPQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQS
CCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
GEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPLMSNMAKLLAGVDNAIKVEGFTDDA
CCEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCC
PIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAVGHGANQPVADNATADGRARNRR
CCCCCCCCCCCCCHHHCCCCEEEEHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCE
VTISVQANTFEEPAAENAAPAAKAPGNHTPTPTEVRP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASRRRKQEEEHENHERWLVSYADFITLLFAFFVVMYAISSLNEGKYRVMSSAIMDAFRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GTTITVQTTPPTGGANTMIEIPQTKPIAKSTARNRKAEEAAKLGQLTQNLAKALSPLVQS
CCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
GEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPLMSNMAKLLAGVDNAIKVEGFTDDA
CCEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCC
PIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAVGHGANQPVADNATADGRARNRR
CCCCCCCCCCCCCHHHCCCCEEEEHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCE
VTISVQANTFEEPAAENAAPAAKAPGNHTPTPTEVRP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]