| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497263
Identifier: 34497263
GI number: 34497263
Start: 1966716
End: 1967288
Strand: Direct
Name: 34497263
Synonym: CV_1808
Alternate gene names: NA
Gene position: 1966716-1967288 (Clockwise)
Preceding gene: 34497262
Following gene: 34497264
Centisome position: 41.4
GC content: 68.41
Gene sequence:
>573_bases ATGAACGATAGAGTGGACAGAGAGGGCGGCGTGGCGTTGCGGTTGCACGCCGCTCTGCCCGCAGGCTGGAGCGGCGGGAT CGAACTGCGCGGCGATGGCGAGGCGGGTTACCGGTTGAGCGCGGAAGGGCTGCCGCCGGTTGACGGCGAACTATTGTATT TCGACGCGGACTCGTTCCGGCAGGGCAAGGCCAGCCGTCTGCAATGCCGGCTGGACGGGATGCTGGTCGAGTGCTCGGTG ATGGCTGGGCCTTCCGGCGCCGTCTGCGTACTGGCGGACGGGTTCTACAGCGAAGTCCGCTTGGCCGATCCGTCATCGTC GCGTTTTTCCTCGCGCCGCTCCGGGCGAGCATCGTCGGAGGAGGGCGTGTTGGTCGCGCCGATGCCGGCGACGGTCACCG AGCTGCTGGTGGCGCCGGGCCAGGCCGTGACGGCAGGCCAGCCGGTGGGGCGGATAGAAGCGATGAAAATGGTGATGACG CTGACCGCCCCGAGGGATGGCGTGGTGGGCGAAGTGGCGGTGGCGCCGCGGGATCCGGTTCTCGCCGGACAGCGGCTGAT GGTGTTCGAGTAG
Upstream 100 bases:
>100_bases TGGCCGGGCGCAGGCCGGAGGGCTCGGCCGCGGTGTCGGGCTGGAAACTGCGCAACGATCCGCTGCTGGCGGCCGGCGCG CGAGGCTAGGAGGGGAGTGG
Downstream 100 bases:
>100_bases GCGGTCCCGCGGGGCCGAATCATTACGCTTGAGGAGAAACGATCTTGAGTCTTGAAGCAAGCATTGCCCGTTACGCGGCG ACGATCCAGTTTGAACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNDRVDREGGVALRLHAALPAGWSGGIELRGDGEAGYRLSAEGLPPVDGELLYFDADSFRQGKASRLQCRLDGMLVECSV MAGPSGAVCVLADGFYSEVRLADPSSSRFSSRRSGRASSEEGVLVAPMPATVTELLVAPGQAVTAGQPVGRIEAMKMVMT LTAPRDGVVGEVAVAPRDPVLAGQRLMVFE
Sequences:
>Translated_190_residues MNDRVDREGGVALRLHAALPAGWSGGIELRGDGEAGYRLSAEGLPPVDGELLYFDADSFRQGKASRLQCRLDGMLVECSV MAGPSGAVCVLADGFYSEVRLADPSSSRFSSRRSGRASSEEGVLVAPMPATVTELLVAPGQAVTAGQPVGRIEAMKMVMT LTAPRDGVVGEVAVAPRDPVLAGQRLMVFE >Mature_190_residues MNDRVDREGGVALRLHAALPAGWSGGIELRGDGEAGYRLSAEGLPPVDGELLYFDADSFRQGKASRLQCRLDGMLVECSV MAGPSGAVCVLADGFYSEVRLADPSSSRFSSRRSGRASSEEGVLVAPMPATVTELLVAPGQAVTAGQPVGRIEAMKMVMT LTAPRDGVVGEVAVAPRDPVLAGQRLMVFE
Specific function: Unknown
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19919; Mature: 19919
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRVDREGGVALRLHAALPAGWSGGIELRGDGEAGYRLSAEGLPPVDGELLYFDADSFR CCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC QGKASRLQCRLDGMLVECSVMAGPSGAVCVLADGFYSEVRLADPSSSRFSSRRSGRASSE CCCCCEEEEEECCEEEEEEEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHCCCCCCCC EGVLVAPMPATVTELLVAPGQAVTAGQPVGRIEAMKMVMTLTAPRDGVVGEVAVAPRDPV CCEEEECCCHHHHHHHHCCCCEEECCCCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCC LAGQRLMVFE CCCCEEEEEC >Mature Secondary Structure MNDRVDREGGVALRLHAALPAGWSGGIELRGDGEAGYRLSAEGLPPVDGELLYFDADSFR CCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC QGKASRLQCRLDGMLVECSVMAGPSGAVCVLADGFYSEVRLADPSSSRFSSRRSGRASSE CCCCCEEEEEECCEEEEEEEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHCCCCCCCC EGVLVAPMPATVTELLVAPGQAVTAGQPVGRIEAMKMVMTLTAPRDGVVGEVAVAPRDPV CCEEEECCCHHHHHHHHCCCCEEECCCCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCC LAGQRLMVFE CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA