| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is hmuV [H]
Identifier: 34497248
GI number: 34497248
Start: 1949265
End: 1950065
Strand: Reverse
Name: hmuV [H]
Synonym: CV_1793
Alternate gene names: 34497248
Gene position: 1950065-1949265 (Counterclockwise)
Preceding gene: 34497249
Following gene: 34497247
Centisome position: 41.04
GC content: 70.79
Gene sequence:
>801_bases ATGCTTGAAGCCCGCGGCCTGTCGCTGCGCAAAGGCGGCCGAGCCCTGCTGACCGATGCCGGCCTGTCCCTGAAGCCCGG CGAATTGCTGACCGTGCTGGGGCCGAACGGCGCGGGGAAAAGCACCCTGCTCAAGCTATTGTCGGGGCTGTGGAAGCCGG ATGCCGGCGAAATCCTGATCGCCGGCAGCCCTACGGCGCGGATGCGCAGCGCCGAACTCGCCGGCTGGCGGGCCGTGGTT GAACAGCATCCGGTGACGCCGTCGGGCTGGCGCGGCGCGGAACTGGTCGCCGCAGGCAGTTACCTGTATCCATCCGCAGA CAGGCCGCGCGTCTGCGCGGCCGTGAACGAAGCCTTGCGCCTATGCGATGCGGCCGGACTCGCCGACCGGCACCTGGCCG ACCTGTCCGGCGGCGAGCGGCAGCGCCTGCAACTGGCGCGCGCGCTGTGCCAGCTGCTGCTGTCGCCGCGCCCCGAACGT TATCTGCTGCTGGACGAGCCCACCGCGGCGCAGGACTTCGCGATGGCCGACGCGCTGATGACCCGGGTCCGGACACTGGC CCATGAGTTGGGCATCGGCGCGCTGGCCGTGGTGCACGACCTCAACCTGGCCCTGCGCCACGCCGACCGGGTGCTGCTGC TGAACGACGGCCGCGTCGCCGGCTGCGGCGACAATGCCGCGATGATGGAGCGCGAGCGGCTGGAGGCCATTTACGGCGTG CGGCTGGCGGAGCTGACGCACCCCGAACAACCATGGCGCGCCTTCATTCCCATGCCAGGCCAAGCGACCGGCAAGCCCTG A
Upstream 100 bases:
>100_bases CGCGGGCTGTTGGCGCCGGCGGAATTGCCGGTCGGCGTGATCACCAGCCTGCTGGGCGCGCCCTTCTTCCTGTGGCTGCT GCGCCGCCAGGAGGCCCGAC
Downstream 100 bases:
>100_bases CCTGTATTGCATTAGCCGGGCAAACCTGCGATCCTGACCTTCTCGCATCCGCGAACGGAAGAGAGAAGACATGCCGCTGC TAGCCGCTCTGCAATCGCTT
Product: iron transport system ATP-binding protein
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLEARGLSLRKGGRALLTDAGLSLKPGELLTVLGPNGAGKSTLLKLLSGLWKPDAGEILIAGSPTARMRSAELAGWRAVV EQHPVTPSGWRGAELVAAGSYLYPSADRPRVCAAVNEALRLCDAAGLADRHLADLSGGERQRLQLARALCQLLLSPRPER YLLLDEPTAAQDFAMADALMTRVRTLAHELGIGALAVVHDLNLALRHADRVLLLNDGRVAGCGDNAAMMERERLEAIYGV RLAELTHPEQPWRAFIPMPGQATGKP
Sequences:
>Translated_266_residues MLEARGLSLRKGGRALLTDAGLSLKPGELLTVLGPNGAGKSTLLKLLSGLWKPDAGEILIAGSPTARMRSAELAGWRAVV EQHPVTPSGWRGAELVAAGSYLYPSADRPRVCAAVNEALRLCDAAGLADRHLADLSGGERQRLQLARALCQLLLSPRPER YLLLDEPTAAQDFAMADALMTRVRTLAHELGIGALAVVHDLNLALRHADRVLLLNDGRVAGCGDNAAMMERERLEAIYGV RLAELTHPEQPWRAFIPMPGQATGKP >Mature_266_residues MLEARGLSLRKGGRALLTDAGLSLKPGELLTVLGPNGAGKSTLLKLLSGLWKPDAGEILIAGSPTARMRSAELAGWRAVV EQHPVTPSGWRGAELVAAGSYLYPSADRPRVCAAVNEALRLCDAAGLADRHLADLSGGERQRLQLARALCQLLLSPRPER YLLLDEPTAAQDFAMADALMTRVRTLAHELGIGALAVVHDLNLALRHADRVLLLNDGRVAGCGDNAAMMERERLEAIYGV RLAELTHPEQPWRAFIPMPGQATGKP
Specific function: Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system [H]
COG id: COG4559
COG function: function code P; ABC-type hemin transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955963, Length=234, Percent_Identity=28.6324786324786, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI255708477, Length=231, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI9665248, Length=222, Percent_Identity=30.6306306306306, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI42741659, Length=224, Percent_Identity=28.125, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI31657092, Length=218, Percent_Identity=28.4403669724771, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI73747915, Length=213, Percent_Identity=28.6384976525822, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9955968, Length=231, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9955966, Length=232, Percent_Identity=26.7241379310345, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI45243524, Length=232, Percent_Identity=26.7241379310345, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI73747917, Length=166, Percent_Identity=30.7228915662651, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI21536378, Length=226, Percent_Identity=26.5486725663717, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786345, Length=251, Percent_Identity=37.4501992031873, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87081709, Length=223, Percent_Identity=33.1838565022422, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1790739, Length=255, Percent_Identity=34.5098039215686, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1786803, Length=250, Percent_Identity=32.8, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=33.6448598130841, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1788761, Length=221, Percent_Identity=32.579185520362, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI87081791, Length=231, Percent_Identity=30.3030303030303, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1788165, Length=244, Percent_Identity=33.6065573770492, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1787712, Length=198, Percent_Identity=32.3232323232323, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789873, Length=223, Percent_Identity=34.0807174887892, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=34.1121495327103, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786563, Length=218, Percent_Identity=33.9449541284404, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=28.8135593220339, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787089, Length=236, Percent_Identity=29.6610169491525, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789891, Length=221, Percent_Identity=29.8642533936652, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788002, Length=223, Percent_Identity=33.1838565022422, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=27.8969957081545, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48994997, Length=219, Percent_Identity=32.4200913242009, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=30, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786872, Length=227, Percent_Identity=31.7180616740088, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789991, Length=263, Percent_Identity=27.3764258555133, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1788450, Length=235, Percent_Identity=31.4893617021277, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789864, Length=239, Percent_Identity=28.8702928870293, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789032, Length=227, Percent_Identity=31.7180616740088, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786698, Length=219, Percent_Identity=28.7671232876712, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786703, Length=214, Percent_Identity=35.5140186915888, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790190, Length=248, Percent_Identity=24.1935483870968, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786398, Length=261, Percent_Identity=26.4367816091954, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=28.0952380952381, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994943, Length=236, Percent_Identity=28.8135593220339, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1787164, Length=212, Percent_Identity=31.6037735849057, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1786253, Length=203, Percent_Identity=33.4975369458128, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787792, Length=274, Percent_Identity=28.4671532846715, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788506, Length=229, Percent_Identity=31.8777292576419, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787758, Length=204, Percent_Identity=28.4313725490196, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI145693107, Length=229, Percent_Identity=29.2576419213974, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789586, Length=233, Percent_Identity=27.4678111587983, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787500, Length=212, Percent_Identity=30.188679245283, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787759, Length=231, Percent_Identity=26.4069264069264, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788897, Length=227, Percent_Identity=29.5154185022026, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788210, Length=245, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994883, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787112, Length=226, Percent_Identity=31.858407079646, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789962, Length=230, Percent_Identity=26.9565217391304, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1788053, Length=212, Percent_Identity=32.5471698113208, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789890, Length=232, Percent_Identity=28.8793103448276, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI87082064, Length=213, Percent_Identity=32.8638497652582, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786653, Length=228, Percent_Identity=28.0701754385965, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787105, Length=214, Percent_Identity=29.4392523364486, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=29.6803652968037, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17567265, Length=242, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17541710, Length=229, Percent_Identity=30.1310043668122, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17569143, Length=231, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25146777, Length=227, Percent_Identity=26.431718061674, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115535101, Length=221, Percent_Identity=26.6968325791855, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193202349, Length=231, Percent_Identity=25.974025974026, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193209708, Length=212, Percent_Identity=28.7735849056604, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17569081, Length=218, Percent_Identity=30.2752293577982, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=213, Percent_Identity=26.2910798122066, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641565, Length=222, Percent_Identity=30.1801801801802, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24653245, Length=220, Percent_Identity=30.4545454545455, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281363262, Length=220, Percent_Identity=30.4545454545455, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24659289, Length=222, Percent_Identity=31.0810810810811, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI17136662, Length=239, Percent_Identity=29.2887029288703, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85726357, Length=228, Percent_Identity=28.0701754385965, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24581407, Length=234, Percent_Identity=30.3418803418803, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45552199, Length=234, Percent_Identity=30.3418803418803, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015863 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28476; Mature: 28476
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEARGLSLRKGGRALLTDAGLSLKPGELLTVLGPNGAGKSTLLKLLSGLWKPDAGEILI CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE AGSPTARMRSAELAGWRAVVEQHPVTPSGWRGAELVAAGSYLYPSADRPRVCAAVNEALR ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHHH LCDAAGLADRHLADLSGGERQRLQLARALCQLLLSPRPERYLLLDEPTAAQDFAMADALM HHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH TRVRTLAHELGIGALAVVHDLNLALRHADRVLLLNDGRVAGCGDNAAMMERERLEAIYGV HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHH RLAELTHPEQPWRAFIPMPGQATGKP HHHHHCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MLEARGLSLRKGGRALLTDAGLSLKPGELLTVLGPNGAGKSTLLKLLSGLWKPDAGEILI CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE AGSPTARMRSAELAGWRAVVEQHPVTPSGWRGAELVAAGSYLYPSADRPRVCAAVNEALR ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHHH LCDAAGLADRHLADLSGGERQRLQLARALCQLLLSPRPERYLLLDEPTAAQDFAMADALM HHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH TRVRTLAHELGIGALAVVHDLNLALRHADRVLLLNDGRVAGCGDNAAMMERERLEAIYGV HHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHH RLAELTHPEQPWRAFIPMPGQATGKP HHHHHCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]