| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497178
Identifier: 34497178
GI number: 34497178
Start: 1864159
End: 1864848
Strand: Direct
Name: 34497178
Synonym: CV_1723
Alternate gene names: NA
Gene position: 1864159-1864848 (Clockwise)
Preceding gene: 34497177
Following gene: 34497180
Centisome position: 39.24
GC content: 63.77
Gene sequence:
>690_bases CTGCCAGATTTGGTGGTCGTCCTTGCCTTCCCGGGTCAGGATGCCCAGGTTGGCGATGAAAGGGCGGTCCGGCGACACCG GCGTGATGTTGAAGCTGGCGAACAGCTCGTAGGCCTTGGCCGCCAGCGGATGGCGGTCGTCCTGCCCCGGCGCCGGCCAG AAGCGGTGGGAGAAGCGGTGCAGCACCGCGTAGCTGGACGGATGCAGCATCACGCCGAAGAAATACAGCGGACGCAGCGG ATGCTGCAGCCAGTGGTACATCACCTGGCGCATCAGGAAGGTGATGTTGCTGTTCTTGCCGCGGAATTCCTTGTACAGCC CGGACTGGACGCGCAGCACGCTGCAGGTGCGCCCGCCTATCTGGCGGCGGAAGCGGTGCATCGTGCAATAGCCGACCAGG CGGCCGTTCTCGTCCCGGTGCAGCAGCAGGCTGCTGTGCTCGGCCGGCGGGGACATCACCAGGTTGATGAAGGCGGGAAG GTCGGTGCCGGCGAAGATGGCGTCGTGGACCTGGAACAGCTCCCGCGCCAGTTGTTCCCTTTCATGATCGGGCAGACGGG CGGGCTCCACGCGGATGGACTGGGCGATGCGGGCCATTTCATACCTCTTTGTGCGTTGCAGCAGAGAAATGGCGGCATGG TAGGAATCGGTGGCAGCGATCGCTACTGTCCTTTATCGCTATGCATTTGA
Upstream 100 bases:
>100_bases CGCCACCGGCGACAGCGGCACCAGCGCCAGCAGGCCGTCGCCCCTGGTGGTAGCCGGGATTGACGCTGAGGAAGAAGCGG TCGGACGGTTTGGTTGAGTT
Downstream 100 bases:
>100_bases CATTAATTTTTAATGATGGAAATGCCTTTTAATTCAGATTCTTATCAAACGACTGTATGAATGCTTTGCGGGTCAACTGG ATGTTGGGACAGGCCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPDLVVVLAFPGQDAQVGDERAVRRHRRDVEAGEQLVGLGRQRMAVVLPRRRPEAVGEAVQHRVAGRMQHHAEEIQRTQR MLQPVVHHLAHQEGDVAVLAAEFLVQPGLDAQHAAGAPAYLAAEAVHRAIADQAAVLVPVQQQAAVLGRRGHHQVDEGGK VGAGEDGVVDLEQLPRQLFPFMIGQTGGLHADGLGDAGHFIPLCALQQRNGGMVGIGGSDRYCPLSLCI
Sequences:
>Translated_229_residues MPDLVVVLAFPGQDAQVGDERAVRRHRRDVEAGEQLVGLGRQRMAVVLPRRRPEAVGEAVQHRVAGRMQHHAEEIQRTQR MLQPVVHHLAHQEGDVAVLAAEFLVQPGLDAQHAAGAPAYLAAEAVHRAIADQAAVLVPVQQQAAVLGRRGHHQVDEGGK VGAGEDGVVDLEQLPRQLFPFMIGQTGGLHADGLGDAGHFIPLCALQQRNGGMVGIGGSDRYCPLSLCI >Mature_228_residues PDLVVVLAFPGQDAQVGDERAVRRHRRDVEAGEQLVGLGRQRMAVVLPRRRPEAVGEAVQHRVAGRMQHHAEEIQRTQRM LQPVVHHLAHQEGDVAVLAAEFLVQPGLDAQHAAGAPAYLAAEAVHRAIADQAAVLVPVQQQAAVLGRRGHHQVDEGGKV GAGEDGVVDLEQLPRQLFPFMIGQTGGLHADGLGDAGHFIPLCALQQRNGGMVGIGGSDRYCPLSLCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24507; Mature: 24376
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLVVVLAFPGQDAQVGDERAVRRHRRDVEAGEQLVGLGRQRMAVVLPRRRPEAVGEAV CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHH QHRVAGRMQHHAEEIQRTQRMLQPVVHHLAHQEGDVAVLAAEFLVQPGLDAQHAAGAPAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHCCCCCHH LAAEAVHRAIADQAAVLVPVQQQAAVLGRRGHHQVDEGGKVGAGEDGVVDLEQLPRQLFP HHHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FMIGQTGGLHADGLGDAGHFIPLCALQQRNGGMVGIGGSDRYCPLSLCI HHHCCCCCCCCCCCCCCCCHHHHHHEECCCCCEEEECCCCCCCEEEECC >Mature Secondary Structure PDLVVVLAFPGQDAQVGDERAVRRHRRDVEAGEQLVGLGRQRMAVVLPRRRPEAVGEAV CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHHHHHH QHRVAGRMQHHAEEIQRTQRMLQPVVHHLAHQEGDVAVLAAEFLVQPGLDAQHAAGAPAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHCCCCCHH LAAEAVHRAIADQAAVLVPVQQQAAVLGRRGHHQVDEGGKVGAGEDGVVDLEQLPRQLFP HHHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FMIGQTGGLHADGLGDAGHFIPLCALQQRNGGMVGIGGSDRYCPLSLCI HHHCCCCCCCCCCCCCCCCHHHHHHEECCCCCEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA