| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497155
Identifier: 34497155
GI number: 34497155
Start: 1840147
End: 1840857
Strand: Reverse
Name: 34497155
Synonym: CV_1700
Alternate gene names: NA
Gene position: 1840857-1840147 (Counterclockwise)
Preceding gene: 34497169
Following gene: 34497154
Centisome position: 38.75
GC content: 73.98
Gene sequence:
>711_bases ATGGCCAAATTCACCAAAACCCGTTATATCTCAGCCGGCTGCCTGCTGCTCGCCCTCGTCCAGGCCCCCCAGATCGCCCT GGCCGCCTCGCCGGCCGAACAGGAAGTGGAGCGCCAGGCGCAGAAGCTGATCCGGCAACGGCTGGCCGACGCCGGGCTTG ACCAAGCCGACATCCGGCTGCAGACGCTCCCGCCGCGCGACCTGCCCGCAACCTGCGCCTCGCCCTGGCAGGCCGAGGCC GGCGACAGCCGCGCCTTCAGCCGCATGCGCTTCGACCTCGCCTGCCCCGCCAGCGGCTGGCGCGGCGGCGTCATCGTCCG CGCCGCCGTCAGCGCCCGGGTGGCGGTGGCCGCGCGCGACCTGCCCGCCGGCGTCGCGCTGGCGCCGCAGGACGTCGCCT GGGCGCGGCGCCCGGTCGGCGACCCCGCCGACCTGTTCGGCCAGGCCAGCCCGCCGCAGGGCCTGGCGTCCAGGACGCCG CTGCGCCAGGATCAGCCGCTGCGCCGCAGGCAGCTGCAGCCGCCGCAATGGGTGAAACGCGGCGACGCCGTCAGCATCGT CGCGCGCCAGGACGGCATCGAGGTCACCAGCGCCGGCGAAGCGCTGGCCAATGGCCGCCAAGGCGAGGTGATCCGCGTGC GCAACACCTCCAGCAACAAGATCATCAACGCCCGGGTCAGCGCCCAAGGAGAAGTCGCGCCGCTGGAGTGA
Upstream 100 bases:
>100_bases CCATGTTCAAGCTATTTGCTATGAATAGCCATTCAATTGGAAAGCGATACTAATAAGCGCGCCCGTCACCGTATACGCAA CAATTACCACGCATTTTGTA
Downstream 100 bases:
>100_bases GCGCTTTCCCTTCCGGCGAATTTGCTAAGCCGAATCTTTCATTTCACAGATTCCATTCGCATCGATACATTTTGCATATC GTCTTATGTATTTTGTATCC
Product: flagella basal body P-ring formation protein flgA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAKFTKTRYISAGCLLLALVQAPQIALAASPAEQEVERQAQKLIRQRLADAGLDQADIRLQTLPPRDLPATCASPWQAEA GDSRAFSRMRFDLACPASGWRGGVIVRAAVSARVAVAARDLPAGVALAPQDVAWARRPVGDPADLFGQASPPQGLASRTP LRQDQPLRRRQLQPPQWVKRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEVAPLE
Sequences:
>Translated_236_residues MAKFTKTRYISAGCLLLALVQAPQIALAASPAEQEVERQAQKLIRQRLADAGLDQADIRLQTLPPRDLPATCASPWQAEA GDSRAFSRMRFDLACPASGWRGGVIVRAAVSARVAVAARDLPAGVALAPQDVAWARRPVGDPADLFGQASPPQGLASRTP LRQDQPLRRRQLQPPQWVKRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEVAPLE >Mature_235_residues AKFTKTRYISAGCLLLALVQAPQIALAASPAEQEVERQAQKLIRQRLADAGLDQADIRLQTLPPRDLPATCASPWQAEAG DSRAFSRMRFDLACPASGWRGGVIVRAAVSARVAVAARDLPAGVALAPQDVAWARRPVGDPADLFGQASPPQGLASRTPL RQDQPLRRRQLQPPQWVKRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEVAPLE
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25260; Mature: 25129
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFTKTRYISAGCLLLALVQAPQIALAASPAEQEVERQAQKLIRQRLADAGLDQADIRL CCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHCEEE QTLPPRDLPATCASPWQAEAGDSRAFSRMRFDLACPASGWRGGVIVRAAVSARVAVAARD EECCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEEHHHHHHHEEECC LPAGVALAPQDVAWARRPVGDPADLFGQASPPQGLASRTPLRQDQPLRRRQLQPPQWVKR CCCCCEECCCHHHHHHCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCHHHHCCCCHHHHHC GDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEVAPLE CCEEEEEEECCCCEEECCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure AKFTKTRYISAGCLLLALVQAPQIALAASPAEQEVERQAQKLIRQRLADAGLDQADIRL CCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHCEEE QTLPPRDLPATCASPWQAEAGDSRAFSRMRFDLACPASGWRGGVIVRAAVSARVAVAARD EECCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEEHHHHHHHEEECC LPAGVALAPQDVAWARRPVGDPADLFGQASPPQGLASRTPLRQDQPLRRRQLQPPQWVKR CCCCCEECCCHHHHHHCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCHHHHCCCCHHHHHC GDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEVAPLE CCEEEEEEECCCCEEECCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA