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The map label for this gene is potC [C]

Identifier: 34497135

GI number: 34497135

Start: 1821607

End: 1822518

Strand: Reverse

Name: potC [C]

Synonym: CV_1680

Alternate gene names: 34497135

Gene position: 1822518-1821607 (Counterclockwise)

Preceding gene: 34497136

Following gene: 34497134

Centisome position: 38.36

GC content: 67.32

Gene sequence:

>912_bases
ATGTCCGCATCCTCAGAATCCATGCCGACGCCCTCCTCCCGCACAGCCAGTCCGCCCAGCGCCGCCCGCGCGCCGCTGCT
GTCGTGGCTGGGCGTCGCGCCCTTCCTGATCTTCGCGCTGCTGTTCCTGATCCTGCCCACCGGCATGCTGATGGTGGGCG
CCTTCCAGGACGCGCAGGGCCATTTCACGCTGAACAATATCGTCCGCCTATTCGACGACAACATCCTCGGCGCCTACCAG
ATCAGCCTGCAGATCAGCGCTGCCTCTGCCATCCTGGGCACCTTGCTCGGCCTGCTGCTGGCGCTGGCGGCGATACGCGG
CGGCCTGCCGGCCTGGATCCGCCCGACGCTGACCACCTTCTCCGGCGTCGCCTCCAACTTCGCCGGCATTCCGCTCGCCT
TCGCCTTCCTGTCCACGCTGGGCCGGATGGGCCTGGTGACGATGCTGCTGCGCAAGTATCTGGACGTCGACCTGTACGCC
GGCGGTTTCTCCATCCTCAGCTTCGCCGGCCTGACCCTGACCTATCTTTACTTCCAGGTGCCGCTGATGGTGCTGATCAT
CGCCCCCGCCGTGGAAGGCCTGAAGGACGAATGGCGCGAGGCCTGCGAGAGCCTGGGCGGTTCCGGCCTCGCCTACTGGC
GCTACATCGCGCTGCCGGTGCTGTGGCCCAGCATGGTGGGCGCCGCGCTGCTCCTGTTCGCCAACGCCTTCGGCGCGGTG
GCCACCGCCTACGCGCTGACCGGCAGCTCGCTCAACATCGTCACCATCCTGTTGTACGCGCAAATCCACGGCGACGTGCT
GCACGACCAGAACCTGGGCTACGCGCTGGCGCTGGGCATGGTCCTGATCACCGGCAGCGCCAACGCCGGCTACATCTGGC
TGCGCAAGCGCAGCCAAAGGGAGGCCGCATGA

Upstream 100 bases:

>100_bases
GCAGTGGGACAGCGTGGTCGGCAGCAACGTGAAGTAAAACGCTGCGCCTAGCTTCATCTCCGGGCCGCCGCTGGCGGCCC
GTTCACCTAGAGAAACACCG

Downstream 100 bases:

>100_bases
AACCCACCGCCACCTCGCGCCTGGGCGCCTGGCTCGCCATCCTGCTGGGCAGCGGCTACTTCCTGCTGCCGCTGATCGCC
ACCTTCGAGTTCAGCCTGAA

Product: ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter; ABC Transporter Membrane Spanning Protein; Transmembrane Component Of ABC Transporter; Permease Of ABC Transporter; Polyamine ABC Transporter Permease Protein; Acriflavin Resistance Protein; Permease; Sulfate ABC Transporter Permease Protein; ABC-Type Transporter Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; ABC Trasnporter Integral Membrane Subunit; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; Spermidine/Putrescine ABC Transporter Permease Protein

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSASSESMPTPSSRTASPPSAARAPLLSWLGVAPFLIFALLFLILPTGMLMVGAFQDAQGHFTLNNIVRLFDDNILGAYQ
ISLQISAASAILGTLLGLLLALAAIRGGLPAWIRPTLTTFSGVASNFAGIPLAFAFLSTLGRMGLVTMLLRKYLDVDLYA
GGFSILSFAGLTLTYLYFQVPLMVLIIAPAVEGLKDEWREACESLGGSGLAYWRYIALPVLWPSMVGAALLLFANAFGAV
ATAYALTGSSLNIVTILLYAQIHGDVLHDQNLGYALALGMVLITGSANAGYIWLRKRSQREAA

Sequences:

>Translated_303_residues
MSASSESMPTPSSRTASPPSAARAPLLSWLGVAPFLIFALLFLILPTGMLMVGAFQDAQGHFTLNNIVRLFDDNILGAYQ
ISLQISAASAILGTLLGLLLALAAIRGGLPAWIRPTLTTFSGVASNFAGIPLAFAFLSTLGRMGLVTMLLRKYLDVDLYA
GGFSILSFAGLTLTYLYFQVPLMVLIIAPAVEGLKDEWREACESLGGSGLAYWRYIALPVLWPSMVGAALLLFANAFGAV
ATAYALTGSSLNIVTILLYAQIHGDVLHDQNLGYALALGMVLITGSANAGYIWLRKRSQREAA
>Mature_302_residues
SASSESMPTPSSRTASPPSAARAPLLSWLGVAPFLIFALLFLILPTGMLMVGAFQDAQGHFTLNNIVRLFDDNILGAYQI
SLQISAASAILGTLLGLLLALAAIRGGLPAWIRPTLTTFSGVASNFAGIPLAFAFLSTLGRMGLVTMLLRKYLDVDLYAG
GFSILSFAGLTLTYLYFQVPLMVLIIAPAVEGLKDEWREACESLGGSGLAYWRYIALPVLWPSMVGAALLLFANAFGAVA
TAYALTGSSLNIVTILLYAQIHGDVLHDQNLGYALALGMVLITGSANAGYIWLRKRSQREAA

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG4132

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32194; Mature: 32063

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSESMPTPSSRTASPPSAARAPLLSWLGVAPFLIFALLFLILPTGMLMVGAFQDAQG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFTLNNIVRLFDDNILGAYQISLQISAASAILGTLLGLLLALAAIRGGLPAWIRPTLTTF
CEEHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SGVASNFAGIPLAFAFLSTLGRMGLVTMLLRKYLDVDLYAGGFSILSFAGLTLTYLYFQV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHH
PLMVLIIAPAVEGLKDEWREACESLGGSGLAYWRYIALPVLWPSMVGAALLLFANAFGAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAYALTGSSLNIVTILLYAQIHGDVLHDQNLGYALALGMVLITGSANAGYIWLRKRSQR
HHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHEECCCCCCEEEEEECCCC
EAA
CCC
>Mature Secondary Structure 
SASSESMPTPSSRTASPPSAARAPLLSWLGVAPFLIFALLFLILPTGMLMVGAFQDAQG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HFTLNNIVRLFDDNILGAYQISLQISAASAILGTLLGLLLALAAIRGGLPAWIRPTLTTF
CEEHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SGVASNFAGIPLAFAFLSTLGRMGLVTMLLRKYLDVDLYAGGFSILSFAGLTLTYLYFQV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHH
PLMVLIIAPAVEGLKDEWREACESLGGSGLAYWRYIALPVLWPSMVGAALLLFANAFGAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAYALTGSSLNIVTILLYAQIHGDVLHDQNLGYALALGMVLITGSANAGYIWLRKRSQR
HHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHEECCCCCCEEEEEECCCC
EAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA