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The map label for this gene is potC [C]

Identifier: 34497134

GI number: 34497134

Start: 1820810

End: 1821610

Strand: Reverse

Name: potC [C]

Synonym: CV_1679

Alternate gene names: 34497134

Gene position: 1821610-1820810 (Counterclockwise)

Preceding gene: 34497135

Following gene: 34497133

Centisome position: 38.34

GC content: 66.54

Gene sequence:

>801_bases
ATGAAACCCACCGCCACCTCGCGCCTGGGCGCCTGGCTCGCCATCCTGCTGGGCAGCGGCTACTTCCTGCTGCCGCTGAT
CGCCACCTTCGAGTTCAGCCTGAAGATGAGGCGCGAAGGCTACAGCTTGGAAGCCTATAAAGTCGTTCTGAGCGATCCCG
GCTTCCAGGCCAGCTTCGGCTACTCCGCGCTGCTGGCGCTGCTGACCATTCTGGCCGGCATCCTGCTGGTGGTGCCCACC
GCCTTCTGGATCCAGCTCAAGCTGCCCAGGCTGCGCCCGCTGATCGAGTTCATCACCCTGCTGCCGCTGGTGATCCCCGC
CATCGTGCTGGTGTTCGGCTACCTGCGCCTCTACGGCAGCGGCGGCTGGCTGCCGTTCACCGGCAGCGAGCGCGGCACCG
ACCTCTTGCTGGTGTTCGGCTACGTGACGCTGGCCCTGCCCTATCTGTACCGCTCGGTGGACACCGGCCTGTCGGCGATA
GATGTGCGCTCGCTGACCGAGGCGGCGCAAAGCCTGGGCAGCGGCTGGTTCGACATCCTCAGGCTGGTGATCTTCCCCAA
TCTGAAAACCGCCATCCTGTCCGGTGCCTTCCTGACCTTCGCCATCGTCATCGGCGAGTTCACGCTGGCCAGCCTGCTGG
CCCGCCCGGCCTTCGGCCCCTACTTGCAGCTGATCGGCGCCAACCGCGCCTACGAACCGGCCGCGCTCGCCATCATCGCC
TTCCTGGTCACCTGGGCGGCGATGGGGCTGATGCAGGTGGTCAGCCGCAACCGCGCCGCCTTCGGCGCCGACGAACATTG
A

Upstream 100 bases:

>100_bases
AGAACCTGGGCTACGCGCTGGCGCTGGGCATGGTCCTGATCACCGGCAGCGCCAACGCCGGCTACATCTGGCTGCGCAAG
CGCAGCCAAAGGGAGGCCGC

Downstream 100 bases:

>100_bases
ATTGGAAACGGAAAGCATCATGGCATTTCTGCAAATCGACCATCTGAACAAACGCTTCGGCCAGCAGGCCGTGGTCCACG
ATTTCAACATGCAGGTGGAG

Product: ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease Protein; Permease Of ABC Transporter; Transmembrane Component Of ABC Transporter; ABC Transporter; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC-Type Transporter Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; Polyamine ABC Transporter Permease Protein; ABC Transporter Membrane Spanning Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKPTATSRLGAWLAILLGSGYFLLPLIATFEFSLKMRREGYSLEAYKVVLSDPGFQASFGYSALLALLTILAGILLVVPT
AFWIQLKLPRLRPLIEFITLLPLVIPAIVLVFGYLRLYGSGGWLPFTGSERGTDLLLVFGYVTLALPYLYRSVDTGLSAI
DVRSLTEAAQSLGSGWFDILRLVIFPNLKTAILSGAFLTFAIVIGEFTLASLLARPAFGPYLQLIGANRAYEPAALAIIA
FLVTWAAMGLMQVVSRNRAAFGADEH

Sequences:

>Translated_266_residues
MKPTATSRLGAWLAILLGSGYFLLPLIATFEFSLKMRREGYSLEAYKVVLSDPGFQASFGYSALLALLTILAGILLVVPT
AFWIQLKLPRLRPLIEFITLLPLVIPAIVLVFGYLRLYGSGGWLPFTGSERGTDLLLVFGYVTLALPYLYRSVDTGLSAI
DVRSLTEAAQSLGSGWFDILRLVIFPNLKTAILSGAFLTFAIVIGEFTLASLLARPAFGPYLQLIGANRAYEPAALAIIA
FLVTWAAMGLMQVVSRNRAAFGADEH
>Mature_266_residues
MKPTATSRLGAWLAILLGSGYFLLPLIATFEFSLKMRREGYSLEAYKVVLSDPGFQASFGYSALLALLTILAGILLVVPT
AFWIQLKLPRLRPLIEFITLLPLVIPAIVLVFGYLRLYGSGGWLPFTGSERGTDLLLVFGYVTLALPYLYRSVDTGLSAI
DVRSLTEAAQSLGSGWFDILRLVIFPNLKTAILSGAFLTFAIVIGEFTLASLLARPAFGPYLQLIGANRAYEPAALAIIA
FLVTWAAMGLMQVVSRNRAAFGADEH

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28943; Mature: 28943

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTATSRLGAWLAILLGSGYFLLPLIATFEFSLKMRREGYSLEAYKVVLSDPGFQASFG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCC
YSALLALLTILAGILLVVPTAFWIQLKLPRLRPLIEFITLLPLVIPAIVLVFGYLRLYGS
HHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGWLPFTGSERGTDLLLVFGYVTLALPYLYRSVDTGLSAIDVRSLTEAAQSLGSGWFDIL
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
RLVIFPNLKTAILSGAFLTFAIVIGEFTLASLLARPAFGPYLQLIGANRAYEPAALAIIA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH
FLVTWAAMGLMQVVSRNRAAFGADEH
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKPTATSRLGAWLAILLGSGYFLLPLIATFEFSLKMRREGYSLEAYKVVLSDPGFQASFG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCC
YSALLALLTILAGILLVVPTAFWIQLKLPRLRPLIEFITLLPLVIPAIVLVFGYLRLYGS
HHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGWLPFTGSERGTDLLLVFGYVTLALPYLYRSVDTGLSAIDVRSLTEAAQSLGSGWFDIL
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
RLVIFPNLKTAILSGAFLTFAIVIGEFTLASLLARPAFGPYLQLIGANRAYEPAALAIIA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH
FLVTWAAMGLMQVVSRNRAAFGADEH
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA