Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yehU [H]

Identifier: 34497120

GI number: 34497120

Start: 1803779

End: 1805551

Strand: Reverse

Name: yehU [H]

Synonym: CV_1665

Alternate gene names: 34497120

Gene position: 1805551-1803779 (Counterclockwise)

Preceding gene: 34497122

Following gene: 34497119

Centisome position: 38.0

GC content: 66.95

Gene sequence:

>1773_bases
TTGAGCCAGAACAAGGCCGCGGGGACGGCACGGTCGTTAAACTGTTCTCGCGCAAACAATCCATGCCATCGAATGATCGT
AGAACTGACCCTGGTGCTGTCGCTGCTGCAGCAGATGTGCGTTTATCTGGTGATCGCCTACCTGCTGTCCAAGACGCCGC
TGTTCATCCCGCTGACCCAGATCACGCTGCAATTGCCCCACAAGCTGGTCTGTTATCTGGTGTTTTCGATGTTTTGCATC
ATGGGCACCTATTTCGGCCTGCACATCCAGGACTCCATCGCCAATACCCGCGCCATCGGCGCGGTGCTGGGCGGCATGCT
GGGCGGCCCCTGGGTGGGGCTGGCGGTGGGCTTCACCGGCGGCCTGCACCGCTATTCGCTGGGCGGGCTCACCGCCGGCG
CCTGCATGGTGTCGACGATGATGGAGGGCCTGCTGGGCGGCCTGGTGCATCTCTACCTGGTGCGCCGCGGCCTGCGCGCG
CGGCTGTTCGACCCGCTGGTGGTGGCGGCGGTGGCCTGCGTCGCCGAGATCGGCCAGATGCTGATCCTGCTGGCGCTGGT
GCGCCCGTCCGAGGCGGCCGAACGCCTGGTGGCCAGCATCGCGCTGCCGATGATGGCGGCCAACACGCTGGGGGCGGCGA
TGTTCATGCGCATTCTGCTGGACCGCCGGGTGCTGGCGGAAAAATACTCCACCGCCTTCTCCGGCAAGGCGCTGCAGATC
GCTGCCCGCGCCGAAGGGGTGCTGCGCCAGGGCTTCGACCCGGAAAACAGCATGACCGTGGCGCGCATCCTGTACGAGGA
GCTGGGCGTCGGCGCGGTGGCCATCACCGACCGCGAGCGGCTGCTGGCCTTCATCGGCATAGGCGCGGATCATCACCTGC
CCGGCACGGCCATCACCTCGCCGCACACCCACCGCGCGATCGAGCGCAACGAGGTGGTGTACGCCGACGGCAACGAAACG
CCCTACCGCTGCTCGATCAGCCCCCAGTGCCGGCTGGCGTCCTCGCTGGTGATCCCGCTGCGCGGCGAGGACGAACGGGT
GATCGGCACCATCAAGCTGTACGAGCCGCGCAACAAGCTGTTCTCCCGCATCAACCTGACGCTGGGCGAAGGCATCGCCC
GCCTGCTGTCCGCCCAGATCCTGCAGGGCCAGTACGATAAACAAAAGCAGCTGCTGGCGCAGACCGAGATCAAACTGCTG
CACGCCCAAGTGAACCCGCACTTCCTGTTCAACGCTCTGAACACGCTGTCGGCGGTGATACGGCGCAACCCGGAACATGC
CCGCCGGCTGGTGCAGTACCTGTCCACCTTCTTCCGCAAGAACCTGAAACGCTCCGGCGAAGCGGCGACGCTGGAGGACG
AGATCGAACACGTCAGCGCCTACCTGCGCATCGAGGAAGCGCGCTTCGCCGGGAGGCTGGACGTGGAGATCTCGCTGGAC
GAGGCGGCCCGCCGGGCGCGGCTGCCGGCGTTCTCGCTGCAGCCCATCGTCGAGAATGCCATCAAGCACGGCACCTCCCA
ACTACTGGAAGCCGGCCGCATCCGCATCGCCGCGCGCTGCGCCGACGGCAGGCTTTGCGTGACGGTGGAAGACAACGCCG
GCCTGTACGCGCCGGCCGGCCCCGGCGACGGCTTAGGCATGTCGCTGGTGGACCGGCGCATCCGCGCCCGGCACGGACCG
GCTTACGGCGTGTCGGTGGAGTGCGAGCCGGAGGCCTATACCCGCGTCACGCTCAGCGTGCCCTGCCCCGAGCCTGGAGA
AATCCCATGCTGA

Upstream 100 bases:

>100_bases
CAACGCAGCTAAAGACAACGAAACCGCAAGGATACCGGAAAGCCGCCCGGGCCGACACCAGGCCCCTGGCGCCCGGGCAG
CGGCCGGATGCCGTCCACCC

Downstream 100 bases:

>100_bases
AAACCCTGCTGGTCGACGACGAGCCGCTGGCACGCGACGAATTGCGCGAGCTGCTGGCCGCGCATGGCGATTTCGACATC
GTCGGCGAATGCGGCAACGC

Product: two-component system sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MSQNKAAGTARSLNCSRANNPCHRMIVELTLVLSLLQQMCVYLVIAYLLSKTPLFIPLTQITLQLPHKLVCYLVFSMFCI
MGTYFGLHIQDSIANTRAIGAVLGGMLGGPWVGLAVGFTGGLHRYSLGGLTAGACMVSTMMEGLLGGLVHLYLVRRGLRA
RLFDPLVVAAVACVAEIGQMLILLALVRPSEAAERLVASIALPMMAANTLGAAMFMRILLDRRVLAEKYSTAFSGKALQI
AARAEGVLRQGFDPENSMTVARILYEELGVGAVAITDRERLLAFIGIGADHHLPGTAITSPHTHRAIERNEVVYADGNET
PYRCSISPQCRLASSLVIPLRGEDERVIGTIKLYEPRNKLFSRINLTLGEGIARLLSAQILQGQYDKQKQLLAQTEIKLL
HAQVNPHFLFNALNTLSAVIRRNPEHARRLVQYLSTFFRKNLKRSGEAATLEDEIEHVSAYLRIEEARFAGRLDVEISLD
EAARRARLPAFSLQPIVENAIKHGTSQLLEAGRIRIAARCADGRLCVTVEDNAGLYAPAGPGDGLGMSLVDRRIRARHGP
AYGVSVECEPEAYTRVTLSVPCPEPGEIPC

Sequences:

>Translated_590_residues
MSQNKAAGTARSLNCSRANNPCHRMIVELTLVLSLLQQMCVYLVIAYLLSKTPLFIPLTQITLQLPHKLVCYLVFSMFCI
MGTYFGLHIQDSIANTRAIGAVLGGMLGGPWVGLAVGFTGGLHRYSLGGLTAGACMVSTMMEGLLGGLVHLYLVRRGLRA
RLFDPLVVAAVACVAEIGQMLILLALVRPSEAAERLVASIALPMMAANTLGAAMFMRILLDRRVLAEKYSTAFSGKALQI
AARAEGVLRQGFDPENSMTVARILYEELGVGAVAITDRERLLAFIGIGADHHLPGTAITSPHTHRAIERNEVVYADGNET
PYRCSISPQCRLASSLVIPLRGEDERVIGTIKLYEPRNKLFSRINLTLGEGIARLLSAQILQGQYDKQKQLLAQTEIKLL
HAQVNPHFLFNALNTLSAVIRRNPEHARRLVQYLSTFFRKNLKRSGEAATLEDEIEHVSAYLRIEEARFAGRLDVEISLD
EAARRARLPAFSLQPIVENAIKHGTSQLLEAGRIRIAARCADGRLCVTVEDNAGLYAPAGPGDGLGMSLVDRRIRARHGP
AYGVSVECEPEAYTRVTLSVPCPEPGEIPC
>Mature_589_residues
SQNKAAGTARSLNCSRANNPCHRMIVELTLVLSLLQQMCVYLVIAYLLSKTPLFIPLTQITLQLPHKLVCYLVFSMFCIM
GTYFGLHIQDSIANTRAIGAVLGGMLGGPWVGLAVGFTGGLHRYSLGGLTAGACMVSTMMEGLLGGLVHLYLVRRGLRAR
LFDPLVVAAVACVAEIGQMLILLALVRPSEAAERLVASIALPMMAANTLGAAMFMRILLDRRVLAEKYSTAFSGKALQIA
ARAEGVLRQGFDPENSMTVARILYEELGVGAVAITDRERLLAFIGIGADHHLPGTAITSPHTHRAIERNEVVYADGNETP
YRCSISPQCRLASSLVIPLRGEDERVIGTIKLYEPRNKLFSRINLTLGEGIARLLSAQILQGQYDKQKQLLAQTEIKLLH
AQVNPHFLFNALNTLSAVIRRNPEHARRLVQYLSTFFRKNLKRSGEAATLEDEIEHVSAYLRIEEARFAGRLDVEISLDE
AARRARLPAFSLQPIVENAIKHGTSQLLEAGRIRIAARCADGRLCVTVEDNAGLYAPAGPGDGLGMSLVDRRIRARHGPA
YGVSVECEPEAYTRVTLSVPCPEPGEIPC

Specific function: Unknown

COG id: COG3275

COG function: function code T; Putative regulator of cell autolysis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788446, Length=555, Percent_Identity=67.3873873873874, Blast_Score=758, Evalue=0.0,
Organism=Escherichia coli, GI1788723, Length=547, Percent_Identity=27.7879341864717, Blast_Score=223, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR010559
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 64365; Mature: 64234

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNKAAGTARSLNCSRANNPCHRMIVELTLVLSLLQQMCVYLVIAYLLSKTPLFIPLTQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
ITLQLPHKLVCYLVFSMFCIMGTYFGLHIQDSIANTRAIGAVLGGMLGGPWVGLAVGFTG
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
GLHRYSLGGLTAGACMVSTMMEGLLGGLVHLYLVRRGLRARLFDPLVVAAVACVAEIGQM
CCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LILLALVRPSEAAERLVASIALPMMAANTLGAAMFMRILLDRRVLAEKYSTAFSGKALQI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
AARAEGVLRQGFDPENSMTVARILYEELGVGAVAITDRERLLAFIGIGADHHLPGTAITS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHEEEEEECCCCCCCCCCCCCC
PHTHRAIERNEVVYADGNETPYRCSISPQCRLASSLVIPLRGEDERVIGTIKLYEPRNKL
CCHHHHHCCCCEEEECCCCCCEEECCCCCHHHHCCEEEEECCCCCEEEEEEEEECCHHHH
FSRINLTLGEGIARLLSAQILQGQYDKQKQLLAQTEIKLLHAQVNPHFLFNALNTLSAVI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
RRNPEHARRLVQYLSTFFRKNLKRSGEAATLEDEIEHVSAYLRIEEARFAGRLDVEISLD
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHH
EAARRARLPAFSLQPIVENAIKHGTSQLLEAGRIRIAARCADGRLCVTVEDNAGLYAPAG
HHHHHHCCCCCCHHHHHHHHHHHCHHHHHHCCCEEEEEEECCCEEEEEEECCCCEECCCC
PGDGLGMSLVDRRIRARHGPAYGVSVECEPEAYTRVTLSVPCPEPGEIPC
CCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SQNKAAGTARSLNCSRANNPCHRMIVELTLVLSLLQQMCVYLVIAYLLSKTPLFIPLTQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
ITLQLPHKLVCYLVFSMFCIMGTYFGLHIQDSIANTRAIGAVLGGMLGGPWVGLAVGFTG
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
GLHRYSLGGLTAGACMVSTMMEGLLGGLVHLYLVRRGLRARLFDPLVVAAVACVAEIGQM
CCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LILLALVRPSEAAERLVASIALPMMAANTLGAAMFMRILLDRRVLAEKYSTAFSGKALQI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
AARAEGVLRQGFDPENSMTVARILYEELGVGAVAITDRERLLAFIGIGADHHLPGTAITS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHEEEEEECCCCCCCCCCCCCC
PHTHRAIERNEVVYADGNETPYRCSISPQCRLASSLVIPLRGEDERVIGTIKLYEPRNKL
CCHHHHHCCCCEEEECCCCCCEEECCCCCHHHHCCEEEEECCCCCEEEEEEEEECCHHHH
FSRINLTLGEGIARLLSAQILQGQYDKQKQLLAQTEIKLLHAQVNPHFLFNALNTLSAVI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
RRNPEHARRLVQYLSTFFRKNLKRSGEAATLEDEIEHVSAYLRIEEARFAGRLDVEISLD
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHH
EAARRARLPAFSLQPIVENAIKHGTSQLLEAGRIRIAARCADGRLCVTVEDNAGLYAPAG
HHHHHHCCCCCCHHHHHHHHHHHCHHHHHHCCCEEEEEEECCCEEEEEEECCCCEECCCC
PGDGLGMSLVDRRIRARHGPAYGVSVECEPEAYTRVTLSVPCPEPGEIPC
CCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]