Click here to switch to the map view.

The map label for this gene is panD

Identifier: 34497092

GI number: 34497092

Start: 1774461

End: 1774841

Strand: Direct

Name: panD

Synonym: CV_1637

Alternate gene names: 34497092

Gene position: 1774461-1774841 (Clockwise)

Preceding gene: 34497091

Following gene: 34497094

Centisome position: 37.35

GC content: 64.3

Gene sequence:

>381_bases
ATGCAACGCAATATGCTCAAGTCCAAGCTCCACCGCGTGACCACCACGCATGCCGAGCTGCATTACATCGGCTCCTGCGC
CATCGATGAGAACCTGCTGGAAGCGGCGGACATTCTCGAGTACGAAGAGGTGCAGATCTGGAATGTCACCAACGGCGAGC
GTTTCGCCACTTACGCGATCAAGGCCGAGCGCGGGTCCGGCGTGATTTCGGTCAACGGTTCCGCCGCGCGCCGCGCCGCG
CCGGGCGACCTGCTGATCATCGCCTCGTTCGCGCAGTACGAGGATGCGGAACTGAAGGGCCACTCGCCCAAGCTGGTGTT
CGTCGACGGCGACAACCGCCTGACCGAGGTGAAGGGCGCCACGCCGACCCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
GAAGCGCCTGGTGGTGCTGGCCGCCGCTCGCTTGGGCAAGACCCGTCTGATCGACAATATCGAAGTGTTCCGCTAGGCCG
GGACGAGAAGGAAGGCTGTC

Downstream 100 bases:

>100_bases
GCGCCGGTTTTTCCGCCATCGCCGCGCGTGGCCCGGATGGGCAACCCGCGGCGATTGTCTTTGGATCAGCGCTTCACATA
CTTGGCCAGCAGCTTGGCCA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQRNMLKSKLHRVTTTHAELHYIGSCAIDENLLEAADILEYEEVQIWNVTNGERFATYAIKAERGSGVISVNGSAARRAA
PGDLLIIASFAQYEDAELKGHSPKLVFVDGDNRLTEVKGATPTQPA

Sequences:

>Translated_126_residues
MQRNMLKSKLHRVTTTHAELHYIGSCAIDENLLEAADILEYEEVQIWNVTNGERFATYAIKAERGSGVISVNGSAARRAA
PGDLLIIASFAQYEDAELKGHSPKLVFVDGDNRLTEVKGATPTQPA
>Mature_126_residues
MQRNMLKSKLHRVTTTHAELHYIGSCAIDENLLEAADILEYEEVQIWNVTNGERFATYAIKAERGSGVISVNGSAARRAA
PGDLLIIASFAQYEDAELKGHSPKLVFVDGDNRLTEVKGATPTQPA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=56.3492063492063, Blast_Score=149, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_CHRVO (Q7NXI9)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901307.1
- ProteinModelPortal:   Q7NXI9
- SMR:   Q7NXI9
- GeneID:   2550460
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1637
- NMPDR:   fig|243365.1.peg.1637
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- PhylomeDB:   Q7NXI9
- ProtClustDB:   PRK05449
- BioCyc:   CVIO243365:CV_1637-MONOMER
- BRENDA:   4.1.1.11
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13784; Mature: 13784

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRNMLKSKLHRVTTTHAELHYIGSCAIDENLLEAADILEYEEVQIWNVTNGERFATYAI
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KAERGSGVISVNGSAARRAAPGDLLIIASFAQYEDAELKGHSPKLVFVDGDNRLTEVKGA
EECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCC
TPTQPA
CCCCCC
>Mature Secondary Structure
MQRNMLKSKLHRVTTTHAELHYIGSCAIDENLLEAADILEYEEVQIWNVTNGERFATYAI
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KAERGSGVISVNGSAARRAAPGDLLIIASFAQYEDAELKGHSPKLVFVDGDNRLTEVKGA
EECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCC
TPTQPA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782