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The map label for this gene is arpC [H]

Identifier: 34497083

GI number: 34497083

Start: 1765439

End: 1766968

Strand: Reverse

Name: arpC [H]

Synonym: CV_1628

Alternate gene names: 34497083

Gene position: 1766968-1765439 (Counterclockwise)

Preceding gene: 34497084

Following gene: 34497082

Centisome position: 37.19

GC content: 72.81

Gene sequence:

>1530_bases
GTGTATTCCAGATCCAATCCTCCTTCCGCCCGGCCGCGCCCCGCGGCCGGCGACGGCCTATCCTCTCCCGCGCCCTGGCG
CCGCCTCGCGCTCTTGGCCCTGGTTCTGGCCCAGGCCGGCTGCGCGGTCGGCCCCGACTTCAAGCCGCCCGCGCTGCCGG
ACGCCGCCAAGCGCGGCTATGCCGAGACGCCGCTGGCCGCAACCACCGCCAGCGACGAACGTGCCGGCCCCGCCGGCGCC
GGACAGCGGCTGGTGAACGGCGGCGATTTGCCCGCCCAATGGTGGACGCTGTTCAGATCGCCGGAACTGGACCAGCTGAT
CCGCGCCGCGCTGGCGCACAACCCCTCGCTGGAAGCGGCGCAGGCTGCGCTGGCCCAGGCGCGCGAGAACTACAACGCCG
CCTCCGGCAGCCTGTTGTTTCCCAATGTGAACGCCCAGCTGGGCGGCGGCCGCCAGCGCGCCATCCTCTCCGGCACCGCG
CCCAGCGAATTCAACGTCTACAGCGCCACCGTCAACGTGTCGTACACGCTGGACCTGTTCGGCGGCTCCCGCCGCCAGCT
CGAAGGCCTGATGGCGGCGGCCGACTACCAGCGCTTCCAGACCGAGGCCGCCTACCAGACACTGATCGCCAACGTGGTGA
CCGCCGCCGTCCAGGAAGCCTCGCTGCGCGGCCAGCTGCAGTCCACGCGCGAGCTGCTGAAGGCGCAGGAGGCCCAGCTC
GCCATCGTCGACAAGCAGGTCGCCCTCGGCGCCCAGGCGCGCGCCGCGGCGCTGAGCCAGGGCACGCTGGTGGCGCAGAC
CCGCGCCCAGCTGCAGCCGCTGGAAAAAGCGCTGTCCCAGACCCGCAACCTGTTGGCCACACTGGCCGGCCGCTTCCCCG
GCGAGGGCGGCCTGCCCGAGTTCCGCCTGGAGTCGCTGCGCCTGCCGGACGAGCTGCCGGTGTCGCTGCCGTCCGACCTC
GCCCGCCAACGCCCGGACATCCGCGCCAGCGAGGCGCTGCTGCACCAGGCCAGCGCCAACGTCGGCGTCGCCACCGCCAA
CCAGTACCCGCAGATCACCCTCAGCGGCAGCTACGGCACCCAGCACACGGTGCTGCCCAATACCGACCTCGGCAACACGC
TGTGGAGCGTCAGCGGCGGACTGTTGCAGCCGCTGTTCAACGGCGGCGCGCTCAGCGCCAAGCGCCGCGCCGCCGAGGCC
GCCTACCGGCAAGCGGAGGCCCAGTACCGGACAACCGTGCTGAAAGCCTTCCAGGACGTCGCCGACAGCCTGCGCGCGGT
GGACGCCGACGCCCGGGCGCTGCAGGCCCAGGCCGACGCCGAGGCCAAGGCGCGCGAGTCGCTGGAGGTCCATACCCGCC
AGTACAAGCTGGGCGGCATCAGCTACCTGTCGCTGCTGGACGCGCAACGCAGCTACCAGCAGGCGCGCATCGGCCTGATC
CAGGCCCAGGCGGCGCGCTACAGCGACAGCGCGGCGCTGTTCGCGGCGCTGGGCGGCGGCTGGTGGCAACAGCCCGCGGC
CGCCAACTGA

Upstream 100 bases:

>100_bases
CTTGCTCCGTCCAGGCGAGCCGTCGCAAGGGAAGAAATCGGGGAAGGCCGCGGGTCCGGCTGATGGCCGCGCGGCGTTCC
TGCACATTCAGGAGCACGCT

Downstream 100 bases:

>100_bases
GCGGGCAAGACACACACATCGCCCGCCGGCGACGGCGGGCCAGCCAATTCGAATCGCCATATAGAGAAGACGAATCATGA
CCAAGCGAATGTTGATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MYSRSNPPSARPRPAAGDGLSSPAPWRRLALLALVLAQAGCAVGPDFKPPALPDAAKRGYAETPLAATTASDERAGPAGA
GQRLVNGGDLPAQWWTLFRSPELDQLIRAALAHNPSLEAAQAALAQARENYNAASGSLLFPNVNAQLGGGRQRAILSGTA
PSEFNVYSATVNVSYTLDLFGGSRRQLEGLMAAADYQRFQTEAAYQTLIANVVTAAVQEASLRGQLQSTRELLKAQEAQL
AIVDKQVALGAQARAAALSQGTLVAQTRAQLQPLEKALSQTRNLLATLAGRFPGEGGLPEFRLESLRLPDELPVSLPSDL
ARQRPDIRASEALLHQASANVGVATANQYPQITLSGSYGTQHTVLPNTDLGNTLWSVSGGLLQPLFNGGALSAKRRAAEA
AYRQAEAQYRTTVLKAFQDVADSLRAVDADARALQAQADAEAKARESLEVHTRQYKLGGISYLSLLDAQRSYQQARIGLI
QAQAARYSDSAALFAALGGGWWQQPAAAN

Sequences:

>Translated_509_residues
MYSRSNPPSARPRPAAGDGLSSPAPWRRLALLALVLAQAGCAVGPDFKPPALPDAAKRGYAETPLAATTASDERAGPAGA
GQRLVNGGDLPAQWWTLFRSPELDQLIRAALAHNPSLEAAQAALAQARENYNAASGSLLFPNVNAQLGGGRQRAILSGTA
PSEFNVYSATVNVSYTLDLFGGSRRQLEGLMAAADYQRFQTEAAYQTLIANVVTAAVQEASLRGQLQSTRELLKAQEAQL
AIVDKQVALGAQARAAALSQGTLVAQTRAQLQPLEKALSQTRNLLATLAGRFPGEGGLPEFRLESLRLPDELPVSLPSDL
ARQRPDIRASEALLHQASANVGVATANQYPQITLSGSYGTQHTVLPNTDLGNTLWSVSGGLLQPLFNGGALSAKRRAAEA
AYRQAEAQYRTTVLKAFQDVADSLRAVDADARALQAQADAEAKARESLEVHTRQYKLGGISYLSLLDAQRSYQQARIGLI
QAQAARYSDSAALFAALGGGWWQQPAAAN
>Mature_509_residues
MYSRSNPPSARPRPAAGDGLSSPAPWRRLALLALVLAQAGCAVGPDFKPPALPDAAKRGYAETPLAATTASDERAGPAGA
GQRLVNGGDLPAQWWTLFRSPELDQLIRAALAHNPSLEAAQAALAQARENYNAASGSLLFPNVNAQLGGGRQRAILSGTA
PSEFNVYSATVNVSYTLDLFGGSRRQLEGLMAAADYQRFQTEAAYQTLIANVVTAAVQEASLRGQLQSTRELLKAQEAQL
AIVDKQVALGAQARAAALSQGTLVAQTRAQLQPLEKALSQTRNLLATLAGRFPGEGGLPEFRLESLRLPDELPVSLPSDL
ARQRPDIRASEALLHQASANVGVATANQYPQITLSGSYGTQHTVLPNTDLGNTLWSVSGGLLQPLFNGGALSAKRRAAEA
AYRQAEAQYRTTVLKAFQDVADSLRAVDADARALQAQADAEAKARESLEVHTRQYKLGGISYLSLLDAQRSYQQARIGLI
QAQAARYSDSAALFAALGGGWWQQPAAAN

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=489, Percent_Identity=28.0163599182004, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI2367348, Length=441, Percent_Identity=25.8503401360544, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53907; Mature: 53907

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSRSNPPSARPRPAAGDGLSSPAPWRRLALLALVLAQAGCAVGPDFKPPALPDAAKRGY
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
AETPLAATTASDERAGPAGAGQRLVNGGDLPAQWWTLFRSPELDQLIRAALAHNPSLEAA
CCCCCEEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHH
QAALAQARENYNAASGSLLFPNVNAQLGGGRQRAILSGTAPSEFNVYSATVNVSYTLDLF
HHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEC
GGSRRQLEGLMAAADYQRFQTEAAYQTLIANVVTAAVQEASLRGQLQSTRELLKAQEAQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
AIVDKQVALGAQARAAALSQGTLVAQTRAQLQPLEKALSQTRNLLATLAGRFPGEGGLPE
EEEHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
FRLESLRLPDELPVSLPSDLARQRPDIRASEALLHQASANVGVATANQYPQITLSGSYGT
HHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCC
QHTVLPNTDLGNTLWSVSGGLLQPLFNGGALSAKRRAAEAAYRQAEAQYRTTVLKAFQDV
CCEECCCCCCCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADSLRAVDADARALQAQADAEAKARESLEVHTRQYKLGGISYLSLLDAQRSYQQARIGLI
HHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHH
QAQAARYSDSAALFAALGGGWWQQPAAAN
HHHHHHCCCHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MYSRSNPPSARPRPAAGDGLSSPAPWRRLALLALVLAQAGCAVGPDFKPPALPDAAKRGY
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
AETPLAATTASDERAGPAGAGQRLVNGGDLPAQWWTLFRSPELDQLIRAALAHNPSLEAA
CCCCCEEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHH
QAALAQARENYNAASGSLLFPNVNAQLGGGRQRAILSGTAPSEFNVYSATVNVSYTLDLF
HHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEC
GGSRRQLEGLMAAADYQRFQTEAAYQTLIANVVTAAVQEASLRGQLQSTRELLKAQEAQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
AIVDKQVALGAQARAAALSQGTLVAQTRAQLQPLEKALSQTRNLLATLAGRFPGEGGLPE
EEEHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
FRLESLRLPDELPVSLPSDLARQRPDIRASEALLHQASANVGVATANQYPQITLSGSYGT
HHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCC
QHTVLPNTDLGNTLWSVSGGLLQPLFNGGALSAKRRAAEAAYRQAEAQYRTTVLKAFQDV
CCEECCCCCCCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADSLRAVDADARALQAQADAEAKARESLEVHTRQYKLGGISYLSLLDAQRSYQQARIGLI
HHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHH
QAQAARYSDSAALFAALGGGWWQQPAAAN
HHHHHHCCCHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]