| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is kdpA
Identifier: 34497054
GI number: 34497054
Start: 1724814
End: 1726622
Strand: Reverse
Name: kdpA
Synonym: CV_1599
Alternate gene names: 34497054
Gene position: 1726622-1724814 (Counterclockwise)
Preceding gene: 34497055
Following gene: 34497053
Centisome position: 36.34
GC content: 65.95
Gene sequence:
>1809_bases ATGAGCACACCCGCCATGCTGCAACTAGGGCTGTTCTTGGTTGTGCTGATCGCGCTGGCCTGGCCGCTGGGCGCCTACAT GACGCGCGTCATGCAGGGGGAGAACATCGGCCCGGCGCGCTGGTGCGCGCCGCTGGAACGCGGCTTTTACCGCCTCGCCG GCATCAAGCAGGAGGAGGAGATGGGCTGGCGCGGCTACGCGGTGGCGCTGATCCTGTTCAACGTGCTGGGCGTGGCCGCC GTCTACGCGCTGCAACGGCTGCAAGGCATGCTGCCGTTCAATCCGCAGGCGATGGCCGCGGTATCGCCCGACTCCTCGTT CAACACCGCCATTTCCTTCGTCACCAATACCAACTGGCAAGGCTATGGCGGCGAAACCACGATGAGCTACCTGACCCAGA TGCTGGGTCTGACGGTGCAGAACTTCGTGTCCGCCGCCACCGGCGCCGCGGTGGTGATCGCGCTGATCCGCGGCTTCGCC CGCCACAGCAGTGCCAAGATCGGCAATTTCTGGGTCGACGTCACCCGGATGACGCTGTACGTGCTGCTGCCGCTGGCTGT GGTATTCGCGCTGGTTTTCACCCAGCAGGGCGCCATCCAGAACCTGTCCGCCTACCAGGACGTCCATACCGTCGAAACCG TCAAATACCAGCAGCCCAAGCAGGACGCCAAGGGCAACCCGGTGCTGGGCAAGGACGGCAAACCCGTCATGGAGGACAAG ACCAGCCAGACGCAAACCCTGCCCATGGGCCCGGTGGCCTCGCAGGAAGCAATCAAGATGCTGGGCACCAACGGCGGCGG CTTCTTCAACGCCAACTCCGCCCACCCGTTTGAGAACCCGACCCCGCTGGCCAACTTCCTGCAGGACATCGCGATCTTCC TGATCCCGGCCGCGCTGTGCTTCTTGTTCGGCCGCATGGTCGGCGACCGCCGCCAAGGCTGGGCCATCCTCGCCGCGATG ACCATCATGTTCGCCACCGCGGTGGTGGTGGAAACCCGCGCCGAGCAGGCCGGCGTGCCGCAATACAGCTCGCTGGGCAT AGACCAGCGCGCCAGCCAGCTGCAATCCGGCGGCAATATGGAAGGCAAGGAAGCCCGCTTCGGCATCATCGACACCTCGC TGTTCGTCGCCGTGACCACCTCCGCCTCCTGCGGCGCGGTCAACGCGATGCACGACTCGCTGACGCCGATCGGCGGCCTG GTGCCGATGTTCCTGATGCAGTTGGGCGAAGTGGTGTTCGGCGGCGTCGGCTCCGGCCTGTACGGCATGCTGATCTTCGC CATCCTGGCGGTGTTCATCGCCGGCCTGATGGTGGGTCGCACGCCGGAATACCTGGGCAAGAAGATCGAAACCTACGAGA TGAAGATGACCGCGATCACCATCCTGGTGACGCCGACCCTGGTGCTGGCGCTGACCGCGATCGCCGTCAGCCTGGCCGCC GGCAAGGCCGGCATCGCCAATCCGGCCGCGCACGGCTTCAGCGAGATCCTGTACGCGTTCACCTCGGCCGCCAACAACAA CGGCAGCGCCTTCGCCGGCCTGTCCGCCAACACGCCGTTCTACAACATCATGACCGGCCTCGCGATGTTCTTCGGCCGCT TCTTCATGATCGTGCCCATCCTGGCCATCGCCGGCTCGCTGGCCGCCAAGAAGCGCCTGGCCGTCACCGGCGGCACCCTG CCCACCCACGGCCCGCTGTTCGTGACGCTGCTGATCGGCACCGTGCTGCTGGTGGGCGCCCTCAACTATGTTCCGGCCCT GGCGCTGGGGCCGGTGGTCGAGCACCTGCAAATGCTCGCCGCCCGCTAA
Upstream 100 bases:
>100_bases GGCAAGCAATGACCGCCTGGTACCTGATCAGCGCCCTGCTGGCGCTGGGACTGTTCGTCTATCTGATCTACGCATTGGTC AAACCGGAGAATTTCTAATC
Downstream 100 bases:
>100_bases GCCCGTCAGTCAAGGAAATTCGATATGAACGACAACAATCATTCCAAACCGCTGGCGGCGGCCCCCGACGCCGGCCACAA GAGCGCGAGCAAGTCGCTGC
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MSTPAMLQLGLFLVVLIALAWPLGAYMTRVMQGENIGPARWCAPLERGFYRLAGIKQEEEMGWRGYAVALILFNVLGVAA VYALQRLQGMLPFNPQAMAAVSPDSSFNTAISFVTNTNWQGYGGETTMSYLTQMLGLTVQNFVSAATGAAVVIALIRGFA RHSSAKIGNFWVDVTRMTLYVLLPLAVVFALVFTQQGAIQNLSAYQDVHTVETVKYQQPKQDAKGNPVLGKDGKPVMEDK TSQTQTLPMGPVASQEAIKMLGTNGGGFFNANSAHPFENPTPLANFLQDIAIFLIPAALCFLFGRMVGDRRQGWAILAAM TIMFATAVVVETRAEQAGVPQYSSLGIDQRASQLQSGGNMEGKEARFGIIDTSLFVAVTTSASCGAVNAMHDSLTPIGGL VPMFLMQLGEVVFGGVGSGLYGMLIFAILAVFIAGLMVGRTPEYLGKKIETYEMKMTAITILVTPTLVLALTAIAVSLAA GKAGIANPAAHGFSEILYAFTSAANNNGSAFAGLSANTPFYNIMTGLAMFFGRFFMIVPILAIAGSLAAKKRLAVTGGTL PTHGPLFVTLLIGTVLLVGALNYVPALALGPVVEHLQMLAAR
Sequences:
>Translated_602_residues MSTPAMLQLGLFLVVLIALAWPLGAYMTRVMQGENIGPARWCAPLERGFYRLAGIKQEEEMGWRGYAVALILFNVLGVAA VYALQRLQGMLPFNPQAMAAVSPDSSFNTAISFVTNTNWQGYGGETTMSYLTQMLGLTVQNFVSAATGAAVVIALIRGFA RHSSAKIGNFWVDVTRMTLYVLLPLAVVFALVFTQQGAIQNLSAYQDVHTVETVKYQQPKQDAKGNPVLGKDGKPVMEDK TSQTQTLPMGPVASQEAIKMLGTNGGGFFNANSAHPFENPTPLANFLQDIAIFLIPAALCFLFGRMVGDRRQGWAILAAM TIMFATAVVVETRAEQAGVPQYSSLGIDQRASQLQSGGNMEGKEARFGIIDTSLFVAVTTSASCGAVNAMHDSLTPIGGL VPMFLMQLGEVVFGGVGSGLYGMLIFAILAVFIAGLMVGRTPEYLGKKIETYEMKMTAITILVTPTLVLALTAIAVSLAA GKAGIANPAAHGFSEILYAFTSAANNNGSAFAGLSANTPFYNIMTGLAMFFGRFFMIVPILAIAGSLAAKKRLAVTGGTL PTHGPLFVTLLIGTVLLVGALNYVPALALGPVVEHLQMLAAR >Mature_601_residues STPAMLQLGLFLVVLIALAWPLGAYMTRVMQGENIGPARWCAPLERGFYRLAGIKQEEEMGWRGYAVALILFNVLGVAAV YALQRLQGMLPFNPQAMAAVSPDSSFNTAISFVTNTNWQGYGGETTMSYLTQMLGLTVQNFVSAATGAAVVIALIRGFAR HSSAKIGNFWVDVTRMTLYVLLPLAVVFALVFTQQGAIQNLSAYQDVHTVETVKYQQPKQDAKGNPVLGKDGKPVMEDKT SQTQTLPMGPVASQEAIKMLGTNGGGFFNANSAHPFENPTPLANFLQDIAIFLIPAALCFLFGRMVGDRRQGWAILAAMT IMFATAVVVETRAEQAGVPQYSSLGIDQRASQLQSGGNMEGKEARFGIIDTSLFVAVTTSASCGAVNAMHDSLTPIGGLV PMFLMQLGEVVFGGVGSGLYGMLIFAILAVFIAGLMVGRTPEYLGKKIETYEMKMTAITILVTPTLVLALTAIAVSLAAG KAGIANPAAHGFSEILYAFTSAANNNGSAFAGLSANTPFYNIMTGLAMFFGRFFMIVPILAIAGSLAAKKRLAVTGGTLP THGPLFVTLLIGTVLLVGALNYVPALALGPVVEHLQMLAAR
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family
Homologues:
Organism=Escherichia coli, GI1786915, Length=597, Percent_Identity=57.1189279731993, Blast_Score=653, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKA_CHRVO (Q7NXM7)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901269.1 - GeneID: 2547343 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1599 - NMPDR: fig|243365.1.peg.1599 - HOGENOM: HBG291815 - OMA: MSYLTQM - PhylomeDB: Q7NXM7 - ProtClustDB: PRK05482 - BioCyc: CVIO243365:CV_1599-MONOMER - BRENDA: 3.6.3.12 - HAMAP: MF_00275 - InterPro: IPR004623 - PIRSF: PIRSF001294 - TIGRFAMs: TIGR00680
Pfam domain/function: PF03814 KdpA
EC number: =3.6.3.12
Molecular weight: Translated: 63869; Mature: 63738
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xf8f787c)-; HASH(0xf93f790)-; HASH(0xea5a5b0)-; HASH(0xf28f6b8)-; HASH(0xf3141c0)-; HASH(0xcf9e6fc)-; HASH(0xf1e61d8)-; HASH(0xf43eedc)-; HASH(0xe31ffc4)-; HASH(0xf994924)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPAMLQLGLFLVVLIALAWPLGAYMTRVMQGENIGPARWCAPLERGFYRLAGIKQEEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH MGWRGYAVALILFNVLGVAAVYALQRLQGMLPFNPQAMAAVSPDSSFNTAISFVTNTNWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHEEEEECCCCC GYGGETTMSYLTQMLGLTVQNFVSAATGAAVVIALIRGFARHSSAKIGNFWVDVTRMTLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLLPLAVVFALVFTQQGAIQNLSAYQDVHTVETVKYQQPKQDAKGNPVLGKDGKPVMEDK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TSQTQTLPMGPVASQEAIKMLGTNGGGFFNANSAHPFENPTPLANFLQDIAIFLIPAALC CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FLFGRMVGDRRQGWAILAAMTIMFATAVVVETRAEQAGVPQYSSLGIDQRASQLQSGGNM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCC EGKEARFGIIDTSLFVAVTTSASCGAVNAMHDSLTPIGGLVPMFLMQLGEVVFGGVGSGL CCCCCEEEEEEHHEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH YGMLIFAILAVFIAGLMVGRTPEYLGKKIETYEMKMTAITILVTPTLVLALTAIAVSLAA HHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHC GKAGIANPAAHGFSEILYAFTSAANNNGSAFAGLSANTPFYNIMTGLAMFFGRFFMIVPI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH LAIAGSLAAKKRLAVTGGTLPTHGPLFVTLLIGTVLLVGALNYVPALALGPVVEHLQMLA HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AR CH >Mature Secondary Structure STPAMLQLGLFLVVLIALAWPLGAYMTRVMQGENIGPARWCAPLERGFYRLAGIKQEEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH MGWRGYAVALILFNVLGVAAVYALQRLQGMLPFNPQAMAAVSPDSSFNTAISFVTNTNWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHEEEEECCCCC GYGGETTMSYLTQMLGLTVQNFVSAATGAAVVIALIRGFARHSSAKIGNFWVDVTRMTLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLLPLAVVFALVFTQQGAIQNLSAYQDVHTVETVKYQQPKQDAKGNPVLGKDGKPVMEDK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TSQTQTLPMGPVASQEAIKMLGTNGGGFFNANSAHPFENPTPLANFLQDIAIFLIPAALC CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FLFGRMVGDRRQGWAILAAMTIMFATAVVVETRAEQAGVPQYSSLGIDQRASQLQSGGNM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCC EGKEARFGIIDTSLFVAVTTSASCGAVNAMHDSLTPIGGLVPMFLMQLGEVVFGGVGSGL CCCCCEEEEEEHHEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH YGMLIFAILAVFIAGLMVGRTPEYLGKKIETYEMKMTAITILVTPTLVLALTAIAVSLAA HHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHC GKAGIANPAAHGFSEILYAFTSAANNNGSAFAGLSANTPFYNIMTGLAMFFGRFFMIVPI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH LAIAGSLAAKKRLAVTGGTLPTHGPLFVTLLIGTVLLVGALNYVPALALGPVVEHLQMLA HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AR CH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14500782