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The map label for this gene is yhgF [C]

Identifier: 34496992

GI number: 34496992

Start: 1644076

End: 1646388

Strand: Direct

Name: yhgF [C]

Synonym: CV_1537

Alternate gene names: 34496992

Gene position: 1644076-1646388 (Clockwise)

Preceding gene: 34496991

Following gene: 34496993

Centisome position: 34.6

GC content: 66.32

Gene sequence:

>2313_bases
ATGCTGAAAAGCCTTTCCAGCCGCCTGGCGGCTGAGCTTGCCGTCCGCGAATCCCAGGTGGCGGCCACCATCGAACTGAT
CGACGGCGGCGCCACCGTTCCCTTCATCGCCCGTTACCGCAAGGAAGTCACCGGCGGCCTGGACGACACCCAGTTGCGCA
CGCTGGCAGAGCGCCTGGTCTATCTGCGCGAGATGGATGATCGCCGCGACAGCATCCTCAAGAGCATCGCCGAGCAAGGC
AAGCTCACCCCCGAACTGGAAGCGGCTCTCTACGCCAGCGACAACAAGACCACGCTGGAAGATCTTTACCTCCCTTACAA
ACCCAAGCGCCGCACCAAGGCGCAGATCGCCCGCGAAGCCGGCCTGGAGCCGCTGGCCGACAGCCTGCTGGCCGATCCGT
CGCAAGACCCGAACGTGCTGGCCGAAACCTATATCAATGCCGAAGCCGGCGTCGCCGACGCCAAGGCGGCGCTGGACGGC
GCGCGCGCCATCCTGATCGAGCGCTTCGCGGAAGACGCCGAACTGTTGGGCCAACTGCGCGAAAAGCTTTGGAACGAGGG
CGAACTGGCCGCCGCCGTGGTGGCCGGCAAGGAAAACGAGGGCGCCAAGTTCTCCGACTACTTCGATCATCGCGAGCACA
TCAAGGCGATTCCCTCGCACCGCGCGCTGGCGCTCTTGCGAGGCCGCAACGAGGGCGTGCTGAGCGTTGCGTTGAAATAC
CAGCCGGATGAAACGCCGATCACCGAGCGCTCAGCCTATGAAATGCTGATCGCCGCCCGCTTCGGCATCAAGGATGCCGG
CCGCGCCGCCGACAAGTGGCTGCTGGACGGCGTGCGCCTGTGCTGGCGCGCCAAGATATTCCTGTCGCTGGAGCTCGAGC
TGGTGTCGCGGCTGAAAGATGCCGCCGACGGCGAGGCAATCAAGGTGTTCGCCGCCAATCTGCACGACTTGCTGCTGGCC
GCCCCGGCCGGCCGCCGCGCCACCCTGGGCCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTGGCAGTGGTCGACGATAC
CGGCAAGGTGTTGGACACCGCCACCATCTATCCGCACGAGCCGCGCCGCGAATGGGACAAGTCCATCGCCATCCTCGGCG
CGCTGTGCGCGCGCCACAAGGTTGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGACCGACAAGCTGGCGCAG
GACCTGATCAAGGCCTTCCCGCAACTCTCCATGACCAAGATCGTGGTGTCCGAAGCCGGCGCTTCGGTGTATTCGGCATC
CGAGCTGGCGGCCAAGGAATTCCCGGATATGGACGTGAGCCTGCGCGGCGCGGTGTCGATCGCCCGCCGCCTGCAGGACC
CGCTGGCCGAACTGGTGAAGATCGACCCCAAGTCCATCGGCGTCGGCCAATACCAGCACGACGTCAACCAGAGCCAGCTG
GCGCGCGCGCTGGATGGCGTGGTGGAGGACTGCGTGAACGCGGTGGGCGTCGACGTCAACACCGCCTCGGTGCCGCTGCT
GACCCGCATCTCCGGCCTCAACGCGACGCTGGCGTCCAATATCGTGTCCTACCGCGACCAGAACGGCGCGTTCCGCACTC
GCAAGGAGCTGCTGAAAGTGCCGCGTCTGGGCGACAAGACCTTTGAGCAGGCGGCCGGCTTCCTGCGCATCGCCGGCGGC
GACAATCCGCTGGACGCGTCGTCGGTGCACCCGGAAGCCTATCCGGTGGTGGAAAAGATCGTGGCCAAGGCCGGCCGCGA
CGTGAAATCGCTGATTGGGGACTCCGCATTCCTGAAATCGGTGCGCGCCGCCGACTACACCGACGAGCGCTTCGGCCTGC
CGACGGTGATGGACATCCTGAAAGAACTGGACAAGCCGGGCCGTGATCCGCGTCCGGAGTTCAAGACCGCCACCTTCCAG
GACGGTGTCGAGGACATCAAGCACCTGCAGCCGGGCATGGTGCTGGAAGGCGTGGTCACCAATGTGGCCAACTTCGGCGC
CTTCGTCGACATCGGCGTGCACCAGGACGGCCTGGTCCACATTTCGGCGCTGTCCAACAAGTTCATCGATGATCCGCGCA
AGGTGGTCAAGGCCGGCGACGTGGTCAAGGTCAAAGTGCTGGAAGTGGACGTGGCGCGCAAGCGCATCGCGCTGACCATG
CGGCTGGACGACGAGGTCGGTTCCGGCAACAGTCGCGGCGGCCGCGGCGACAGCCGCTCCGACAACCGCCCGCGGCAGCC
GCGCGGCCAGTCTGCCGCGCCGCAGGGCGATACGGCGATGGCCGCAGCCTTCGCCAAGCTGCGCAAGGGATGA

Upstream 100 bases:

>100_bases
AAGAAGCCCAGGCCTGGCTGGCACGCCCCGTCGCGGCTTGATTTTGCGGCGGATGGCGGTACAGTAGCGTTTTTTGTTCG
ACGCGAAAGAATAAAAACCG

Downstream 100 bases:

>100_bases
TGTGACTGTATAGAGGTGTCTGGAACAGGCCGGCGGCGACGCCGGCCTGTTTGTTTTCTGCCGTTGGCGCGGGGGTGAGG
CGGGCAGGTTGCGCTTTGCG

Product: transcriptional accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MLKSLSSRLAAELAVRESQVAATIELIDGGATVPFIARYRKEVTGGLDDTQLRTLAERLVYLREMDDRRDSILKSIAEQG
KLTPELEAALYASDNKTTLEDLYLPYKPKRRTKAQIAREAGLEPLADSLLADPSQDPNVLAETYINAEAGVADAKAALDG
ARAILIERFAEDAELLGQLREKLWNEGELAAAVVAGKENEGAKFSDYFDHREHIKAIPSHRALALLRGRNEGVLSVALKY
QPDETPITERSAYEMLIAARFGIKDAGRAADKWLLDGVRLCWRAKIFLSLELELVSRLKDAADGEAIKVFAANLHDLLLA
APAGRRATLGLDPGLRTGCKVAVVDDTGKVLDTATIYPHEPRREWDKSIAILGALCARHKVDLIAIGNGTASRETDKLAQ
DLIKAFPQLSMTKIVVSEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQL
ARALDGVVEDCVNAVGVDVNTASVPLLTRISGLNATLASNIVSYRDQNGAFRTRKELLKVPRLGDKTFEQAAGFLRIAGG
DNPLDASSVHPEAYPVVEKIVAKAGRDVKSLIGDSAFLKSVRAADYTDERFGLPTVMDILKELDKPGRDPRPEFKTATFQ
DGVEDIKHLQPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALSNKFIDDPRKVVKAGDVVKVKVLEVDVARKRIALTM
RLDDEVGSGNSRGGRGDSRSDNRPRQPRGQSAAPQGDTAMAAAFAKLRKG

Sequences:

>Translated_770_residues
MLKSLSSRLAAELAVRESQVAATIELIDGGATVPFIARYRKEVTGGLDDTQLRTLAERLVYLREMDDRRDSILKSIAEQG
KLTPELEAALYASDNKTTLEDLYLPYKPKRRTKAQIAREAGLEPLADSLLADPSQDPNVLAETYINAEAGVADAKAALDG
ARAILIERFAEDAELLGQLREKLWNEGELAAAVVAGKENEGAKFSDYFDHREHIKAIPSHRALALLRGRNEGVLSVALKY
QPDETPITERSAYEMLIAARFGIKDAGRAADKWLLDGVRLCWRAKIFLSLELELVSRLKDAADGEAIKVFAANLHDLLLA
APAGRRATLGLDPGLRTGCKVAVVDDTGKVLDTATIYPHEPRREWDKSIAILGALCARHKVDLIAIGNGTASRETDKLAQ
DLIKAFPQLSMTKIVVSEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQL
ARALDGVVEDCVNAVGVDVNTASVPLLTRISGLNATLASNIVSYRDQNGAFRTRKELLKVPRLGDKTFEQAAGFLRIAGG
DNPLDASSVHPEAYPVVEKIVAKAGRDVKSLIGDSAFLKSVRAADYTDERFGLPTVMDILKELDKPGRDPRPEFKTATFQ
DGVEDIKHLQPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALSNKFIDDPRKVVKAGDVVKVKVLEVDVARKRIALTM
RLDDEVGSGNSRGGRGDSRSDNRPRQPRGQSAAPQGDTAMAAAFAKLRKG
>Mature_770_residues
MLKSLSSRLAAELAVRESQVAATIELIDGGATVPFIARYRKEVTGGLDDTQLRTLAERLVYLREMDDRRDSILKSIAEQG
KLTPELEAALYASDNKTTLEDLYLPYKPKRRTKAQIAREAGLEPLADSLLADPSQDPNVLAETYINAEAGVADAKAALDG
ARAILIERFAEDAELLGQLREKLWNEGELAAAVVAGKENEGAKFSDYFDHREHIKAIPSHRALALLRGRNEGVLSVALKY
QPDETPITERSAYEMLIAARFGIKDAGRAADKWLLDGVRLCWRAKIFLSLELELVSRLKDAADGEAIKVFAANLHDLLLA
APAGRRATLGLDPGLRTGCKVAVVDDTGKVLDTATIYPHEPRREWDKSIAILGALCARHKVDLIAIGNGTASRETDKLAQ
DLIKAFPQLSMTKIVVSEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQL
ARALDGVVEDCVNAVGVDVNTASVPLLTRISGLNATLASNIVSYRDQNGAFRTRKELLKVPRLGDKTFEQAAGFLRIAGG
DNPLDASSVHPEAYPVVEKIVAKAGRDVKSLIGDSAFLKSVRAADYTDERFGLPTVMDILKELDKPGRDPRPEFKTATFQ
DGVEDIKHLQPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALSNKFIDDPRKVVKAGDVVKVKVLEVDVARKRIALTM
RLDDEVGSGNSRGGRGDSRSDNRPRQPRGQSAAPQGDTAMAAAFAKLRKG

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=801, Percent_Identity=33.7078651685393, Blast_Score=362, Evalue=1e-100,
Organism=Homo sapiens, GI27597090, Length=796, Percent_Identity=22.1105527638191, Blast_Score=89, Evalue=1e-17,
Organism=Escherichia coli, GI87082262, Length=762, Percent_Identity=64.4356955380577, Blast_Score=981, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=40.7894736842105, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=724, Percent_Identity=29.8342541436464, Blast_Score=255, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17552892, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6321552, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI62484314, Length=777, Percent_Identity=33.5907335907336, Blast_Score=372, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 83444; Mature: 83444

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLSSRLAAELAVRESQVAATIELIDGGATVPFIARYRKEVTGGLDDTQLRTLAERLV
CCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLREMDDRRDSILKSIAEQGKLTPELEAALYASDNKTTLEDLYLPYKPKRRTKAQIAREA
HHHHHCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCHHHHCCCCCCCHHHHHHHHHHC
GLEPLADSLLADPSQDPNVLAETYINAEAGVADAKAALDGARAILIERFAEDAELLGQLR
CCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLWNEGELAAAVVAGKENEGAKFSDYFDHREHIKAIPSHRALALLRGRNEGVLSVALKY
HHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEE
QPDETPITERSAYEMLIAARFGIKDAGRAADKWLLDGVRLCWRAKIFLSLELELVSRLKD
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHH
AADGEAIKVFAANLHDLLLAAPAGRRATLGLDPGLRTGCKVAVVDDTGKVLDTATIYPHE
CCCCCEEEEEHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCC
PRREWDKSIAILGALCARHKVDLIAIGNGTASRETDKLAQDLIKAFPQLSMTKIVVSEAG
CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
ASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQL
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHH
ARALDGVVEDCVNAVGVDVNTASVPLLTRISGLNATLASNIVSYRDQNGAFRTRKELLKV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHC
PRLGDKTFEQAAGFLRIAGGDNPLDASSVHPEAYPVVEKIVAKAGRDVKSLIGDSAFLKS
CCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHH
VRAADYTDERFGLPTVMDILKELDKPGRDPRPEFKTATFQDGVEDIKHLQPGMVLEGVVT
HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
NVANFGAFVDIGVHQDGLVHISALSNKFIDDPRKVVKAGDVVKVKVLEVDVARKRIALTM
HHHHCCCEEEECCCCCCCEEEEHHHHHHCCCHHHHHHCCCEEEEEEEEEHHCCCEEEEEE
RLDDEVGSGNSRGGRGDSRSDNRPRQPRGQSAAPQGDTAMAAAFAKLRKG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLKSLSSRLAAELAVRESQVAATIELIDGGATVPFIARYRKEVTGGLDDTQLRTLAERLV
CCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLREMDDRRDSILKSIAEQGKLTPELEAALYASDNKTTLEDLYLPYKPKRRTKAQIAREA
HHHHHCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCHHHHCCCCCCCHHHHHHHHHHC
GLEPLADSLLADPSQDPNVLAETYINAEAGVADAKAALDGARAILIERFAEDAELLGQLR
CCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLWNEGELAAAVVAGKENEGAKFSDYFDHREHIKAIPSHRALALLRGRNEGVLSVALKY
HHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEE
QPDETPITERSAYEMLIAARFGIKDAGRAADKWLLDGVRLCWRAKIFLSLELELVSRLKD
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHH
AADGEAIKVFAANLHDLLLAAPAGRRATLGLDPGLRTGCKVAVVDDTGKVLDTATIYPHE
CCCCCEEEEEHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCC
PRREWDKSIAILGALCARHKVDLIAIGNGTASRETDKLAQDLIKAFPQLSMTKIVVSEAG
CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
ASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQL
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHH
ARALDGVVEDCVNAVGVDVNTASVPLLTRISGLNATLASNIVSYRDQNGAFRTRKELLKV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHC
PRLGDKTFEQAAGFLRIAGGDNPLDASSVHPEAYPVVEKIVAKAGRDVKSLIGDSAFLKS
CCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHH
VRAADYTDERFGLPTVMDILKELDKPGRDPRPEFKTATFQDGVEDIKHLQPGMVLEGVVT
HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
NVANFGAFVDIGVHQDGLVHISALSNKFIDDPRKVVKAGDVVKVKVLEVDVARKRIALTM
HHHHCCCEEEECCCCCCCEEEEHHHHHHCCCHHHHHHCCCEEEEEEEEEHHCCCEEEEEE
RLDDEVGSGNSRGGRGDSRSDNRPRQPRGQSAAPQGDTAMAAAFAKLRKG
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]