| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496988
Identifier: 34496988
GI number: 34496988
Start: 1641381
End: 1641905
Strand: Direct
Name: 34496988
Synonym: CV_1533
Alternate gene names: NA
Gene position: 1641381-1641905 (Clockwise)
Preceding gene: 34496987
Following gene: 34496989
Centisome position: 34.55
GC content: 65.33
Gene sequence:
>525_bases ATGTCCGCTATTTTCCGCATGCTGGTATTGGGCGCGCTGCTGGCCAGTCCGCTGGCGCTGGCGGCCAATTACACCGATCC GGTGAGCAAGGTGCGTTTTACTTTGCCGCCAGGCTGGAAGGTGCGCGCCAGCGTCGTCGACCGCGTGCGGGTGTTGAAGG TGATCCCGCCCAAGGCGGATCAGCGCGAGCGCGCGGCGATTTCGGTGCAGATCGGGCTGCGCAAGCCGGGGCGAAGCGAT ACGCTGCCGAAATTGGCGGCGACGTTCCGCCAAGAGGACGGCGATCGCGAGGCGGCCAACTTCGTCCGCGTCAACCAGAA AGCCGGCCGGCTGGTCACCGAGTACCGCGACGGCCGCTTCGTGTCGAATCGGCTGTGGATCGTGCGCCATAATCTGCACG TGATCCAGTTGCTGGACAAGAACCGGCTGCTGGAGGCGCGCTGCACCGCCAACGCGTCCGAATTCAAGACCTACCGCCGC CAGATGGAAGCCATCTGCCTGTCCGCGCAATGGTCCCGGCGCTGA
Upstream 100 bases:
>100_bases ATGGGATCGGCATTGGCTGGCTGAAGAGGCAAGTTAAATGCCATAATGCAGAGGCGCGGGCATTCCGCGCCTTTTTTTAT CCTTATCTTCGGCCGAGATC
Downstream 100 bases:
>100_bases GCCGGCTCGGCGCCGGCTGGATGATACTGGCCGCGGCCAGCTTCGCGCTGATGAGCGCCTGCGCCAAGCTGGGCGCGGCA GATTTCAACTCGGTGGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSAIFRMLVLGALLASPLALAANYTDPVSKVRFTLPPGWKVRASVVDRVRVLKVIPPKADQRERAAISVQIGLRKPGRSD TLPKLAATFRQEDGDREAANFVRVNQKAGRLVTEYRDGRFVSNRLWIVRHNLHVIQLLDKNRLLEARCTANASEFKTYRR QMEAICLSAQWSRR
Sequences:
>Translated_174_residues MSAIFRMLVLGALLASPLALAANYTDPVSKVRFTLPPGWKVRASVVDRVRVLKVIPPKADQRERAAISVQIGLRKPGRSD TLPKLAATFRQEDGDREAANFVRVNQKAGRLVTEYRDGRFVSNRLWIVRHNLHVIQLLDKNRLLEARCTANASEFKTYRR QMEAICLSAQWSRR >Mature_173_residues SAIFRMLVLGALLASPLALAANYTDPVSKVRFTLPPGWKVRASVVDRVRVLKVIPPKADQRERAAISVQIGLRKPGRSDT LPKLAATFRQEDGDREAANFVRVNQKAGRLVTEYRDGRFVSNRLWIVRHNLHVIQLLDKNRLLEARCTANASEFKTYRRQ MEAICLSAQWSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19794; Mature: 19663
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIFRMLVLGALLASPLALAANYTDPVSKVRFTLPPGWKVRASVVDRVRVLKVIPPKAD CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCC QRERAAISVQIGLRKPGRSDTLPKLAATFRQEDGDREAANFVRVNQKAGRLVTEYRDGRF CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHCHHHHHHCCCEE VSNRLWIVRHNLHVIQLLDKNRLLEARCTANASEFKTYRRQMEAICLSAQWSRR ECCEEEEEECCCEEEEEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAIFRMLVLGALLASPLALAANYTDPVSKVRFTLPPGWKVRASVVDRVRVLKVIPPKAD HHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCC QRERAAISVQIGLRKPGRSDTLPKLAATFRQEDGDREAANFVRVNQKAGRLVTEYRDGRF CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHCHHHHHHCCCEE VSNRLWIVRHNLHVIQLLDKNRLLEARCTANASEFKTYRRQMEAICLSAQWSRR ECCEEEEEECCCEEEEEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA