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The map label for this gene is bphA1 [H]

Identifier: 34496987

GI number: 34496987

Start: 1640186

End: 1641304

Strand: Direct

Name: bphA1 [H]

Synonym: CV_1532

Alternate gene names: 34496987

Gene position: 1640186-1641304 (Clockwise)

Preceding gene: 34496984

Following gene: 34496988

Centisome position: 34.52

GC content: 62.02

Gene sequence:

>1119_bases
GTGGGAATAATGTCTGATCTGGCTTCTGCTCAACTGCTTCAAGCATCCGCAGCCCAGCTACCCGTCTATACCTATTTCGA
TCCCGCGTTCTATGCCAAGGAGCAGGCGCTGCTGTTCGCAGACGCCCCGCAGTATTACGGCCATGAGCTGATGGCGCCCA
ATGCCGGCGACTATCACACGCTGGAATGGATGGGGCATGGCAAGATGCTCAAGAATGTGGACGGCGAGATCAAGCTGATC
TCCAACGTCTGCCGCCACCGCCAGGCCATCATCTATAAAGGGCGCGGCAACGGCAACCATATCGTCTGCAACCTGCATGG
CTGGACTTACGACGCCGGCGGCAAGCTGGTGGGCGCGCCGCACTTCCCCGAGACGCCGTGCCTGAACCTGGGCCAGACCG
AGCTGACCCGCTGGAACGGCTTGCTGTTCGACGCGCGCCGCGACGTGGCGGCGGACTTGGCCACATTGGGCGTGGCCAAG
CACATGAGCTTCGATGGCTACGCCTTCCACTCGACGCACAGCGCCGACTACGACTTCAACTGGAAGACCTTCATCGAGGT
GTACTCGGAGGACTACCACGTCGATCCCTTCCACCCCGGTCTCGGCAATTTCGTCGATTGCGGCGACCTGAAATGGGAGT
GGGGCGACAGCTACCACGTGCAGACGGTGGGCGTGAAGAACCGCCTGGCGCGCGCCGGCTCCAAGGTGTACGGCAAGTGG
CACGAGGAAGTGCGCCGCCGCTACGCCGAACAGCAGCCGGAATTCGGCGCCATCTGGCTGACCTACTACCCCAACATCAT
GGTGGAGTGGTATCCCCACGTGCTGGTGGTCAGCGTGGTGATTCCGCGCGGCCCGGAAAAGTGCACCGTGATCACCGAGT
TCTACTATCCGGAAGACGTGGTGTGGTTCGAGCCGGAATTCATCGAGGCGGAGCAGGCCGCCTACTTCGAAACCGCGAAG
GAAGACGACGAGATCTGCATCCGCATGCATGAGGGCCGCAAGGCGCTGTGGATGGCCGGCGTCAGCGAGGTGGGGCCGTA
CCAGTCCCCGACCGAGGAAGGCATGCAGCACTTCCACGAGTACTATCGGCGTCTGATGGGATCGGCATTGGCTGGCTGA

Upstream 100 bases:

>100_bases
AAGACAGGGTTCCCCCTTGTTTTGATTGATTGTTTTTGATAGTCCCGCAAACTCGTCCCGAGCGAGATTCGGCTGGTCTT
ATATCTTCTTCCACGGAGGT

Downstream 100 bases:

>100_bases
AGAGGCAAGTTAAATGCCATAATGCAGAGGCGCGGGCATTCCGCGCCTTTTTTTATCCTTATCTTCGGCCGAGATCATGT
CCGCTATTTTCCGCATGCTG

Product: dioxygenase subunit alpha

Products: NA

Alternate protein names: Biphenyl 2,3-dioxygenase [H]

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MGIMSDLASAQLLQASAAQLPVYTYFDPAFYAKEQALLFADAPQYYGHELMAPNAGDYHTLEWMGHGKMLKNVDGEIKLI
SNVCRHRQAIIYKGRGNGNHIVCNLHGWTYDAGGKLVGAPHFPETPCLNLGQTELTRWNGLLFDARRDVAADLATLGVAK
HMSFDGYAFHSTHSADYDFNWKTFIEVYSEDYHVDPFHPGLGNFVDCGDLKWEWGDSYHVQTVGVKNRLARAGSKVYGKW
HEEVRRRYAEQQPEFGAIWLTYYPNIMVEWYPHVLVVSVVIPRGPEKCTVITEFYYPEDVVWFEPEFIEAEQAAYFETAK
EDDEICIRMHEGRKALWMAGVSEVGPYQSPTEEGMQHFHEYYRRLMGSALAG

Sequences:

>Translated_372_residues
MGIMSDLASAQLLQASAAQLPVYTYFDPAFYAKEQALLFADAPQYYGHELMAPNAGDYHTLEWMGHGKMLKNVDGEIKLI
SNVCRHRQAIIYKGRGNGNHIVCNLHGWTYDAGGKLVGAPHFPETPCLNLGQTELTRWNGLLFDARRDVAADLATLGVAK
HMSFDGYAFHSTHSADYDFNWKTFIEVYSEDYHVDPFHPGLGNFVDCGDLKWEWGDSYHVQTVGVKNRLARAGSKVYGKW
HEEVRRRYAEQQPEFGAIWLTYYPNIMVEWYPHVLVVSVVIPRGPEKCTVITEFYYPEDVVWFEPEFIEAEQAAYFETAK
EDDEICIRMHEGRKALWMAGVSEVGPYQSPTEEGMQHFHEYYRRLMGSALAG
>Mature_371_residues
GIMSDLASAQLLQASAAQLPVYTYFDPAFYAKEQALLFADAPQYYGHELMAPNAGDYHTLEWMGHGKMLKNVDGEIKLIS
NVCRHRQAIIYKGRGNGNHIVCNLHGWTYDAGGKLVGAPHFPETPCLNLGQTELTRWNGLLFDARRDVAADLATLGVAKH
MSFDGYAFHSTHSADYDFNWKTFIEVYSEDYHVDPFHPGLGNFVDCGDLKWEWGDSYHVQTVGVKNRLARAGSKVYGKWH
EEVRRRYAEQQPEFGAIWLTYYPNIMVEWYPHVLVVSVVIPRGPEKCTVITEFYYPEDVVWFEPEFIEAEQAAYFETAKE
DDEICIRMHEGRKALWMAGVSEVGPYQSPTEEGMQHFHEYYRRLMGSALAG

Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788888, Length=126, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR015879
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]

EC number: =1.14.12.18 [H]

Molecular weight: Translated: 42461; Mature: 42330

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIMSDLASAQLLQASAAQLPVYTYFDPAFYAKEQALLFADAPQYYGHELMAPNAGDYHT
CCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEEEECCCHHHCCEEECCCCCCCEE
LEWMGHGKMLKNVDGEIKLISNVCRHRQAIIYKGRGNGNHIVCNLHGWTYDAGGKLVGAP
EEEECCCCHHHCCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCEEECCCCEEEECC
HFPETPCLNLGQTELTRWNGLLFDARRDVAADLATLGVAKHMSFDGYAFHSTHSADYDFN
CCCCCCCCCCCCHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
WKTFIEVYSEDYHVDPFHPGLGNFVDCGDLKWEWGDSYHVQTVGVKNRLARAGSKVYGKW
HHHHEEEECCCCCCCCCCCCCCCCEECCCCEEECCCCEEEEEECHHHHHHHCCHHHHHHH
HEEVRRRYAEQQPEFGAIWLTYYPNIMVEWYPHVLVVSVVIPRGPEKCTVITEFYYPEDV
HHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCE
VWFEPEFIEAEQAAYFETAKEDDEICIRMHEGRKALWMAGVSEVGPYQSPTEEGMQHFHE
EEECCCHHCHHHHHHHHCCCCCCCEEEEEECCCEEEEECCHHHCCCCCCCHHHHHHHHHH
YYRRLMGSALAG
HHHHHHHHHCCC
>Mature Secondary Structure 
GIMSDLASAQLLQASAAQLPVYTYFDPAFYAKEQALLFADAPQYYGHELMAPNAGDYHT
CCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEEEECCCHHHCCEEECCCCCCCEE
LEWMGHGKMLKNVDGEIKLISNVCRHRQAIIYKGRGNGNHIVCNLHGWTYDAGGKLVGAP
EEEECCCCHHHCCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCEEECCCCEEEECC
HFPETPCLNLGQTELTRWNGLLFDARRDVAADLATLGVAKHMSFDGYAFHSTHSADYDFN
CCCCCCCCCCCCHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
WKTFIEVYSEDYHVDPFHPGLGNFVDCGDLKWEWGDSYHVQTVGVKNRLARAGSKVYGKW
HHHHEEEECCCCCCCCCCCCCCCCEECCCCEEECCCCEEEEEECHHHHHHHCCHHHHHHH
HEEVRRRYAEQQPEFGAIWLTYYPNIMVEWYPHVLVVSVVIPRGPEKCTVITEFYYPEDV
HHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCE
VWFEPEFIEAEQAAYFETAKEDDEICIRMHEGRKALWMAGVSEVGPYQSPTEEGMQHFHE
EEECCCHHCHHHHHHHHCCCCCCCEEEEEECCCEEEEECCHHHCCCCCCCHHHHHHHHHH
YYRRLMGSALAG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8048958 [H]