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The map label for this gene is ygiC [C]

Identifier: 34496983

GI number: 34496983

Start: 1634665

End: 1635801

Strand: Direct

Name: ygiC [C]

Synonym: CV_1528

Alternate gene names: 34496983

Gene position: 1634665-1635801 (Clockwise)

Preceding gene: 34496981

Following gene: 34496984

Centisome position: 34.41

GC content: 65.0

Gene sequence:

>1137_bases
ATGGAACGCATCACCGTGCCCAAGCGCGACGATTGGCAGGCCCGCTGCGAGGAGGATGGCTTCAGCATCCACAGCATAGA
CGGCTTGTACTGGAACGAAGGTTACGCCTTCCGCTTCAGCGGCGCCGAAATCGACGCGCTGGACGACGCGACCGCGGAAT
TGCACGCGATGTGCCTGGACCTGGTGGCCGATGTCGTGCAGCGCGGGCATTATCAGGATTACGGGCTGTCCGACGAGGCG
ATCGCCCTGGCCGAATCATCCTGGCGCAGCCACCAGCCGTCGTTGTACGGCCGTTTCGATCTCGCCTACGACGGCCGGTC
GATCAAGCTGCTGGAGTACAACGCCGACACGCCGACAGGCTTGCTGGAGTCCTCGGTGATTCAGTGGCGCTGGCTGACCG
ATCTCGGTCTGCCCGATCAATTCAACTCCATCCACGAAAAGCTGATAGACGGCTGGCGCAGGCTGCTGTTCGCCCATCCG
TCCAGCCTGCACTTCGCCGCCAGCCAATGCGCAGGCGCCGAGGACTGGGATACGCTGCATTACCTGCTGGACACCGCGCT
GCAGGCGGGCTGCCAACGGGCATCGTCGCTGAACATCGAGGACATCGGCGAGCGCGAAGGCTGGCTGGTGGACAGCAGGG
GCGAGCCTATCCAAGCCTTATTCAAGCTATATCCCTTCGAGTGGCTGGCGGCGGAATGCGGCGACGCGCTGGCGAGCACG
CCGACCCGGTTGCTGGAGCCGGCCTGGAAGCTGCTGCTGTCGACCAAGGCCATCTTGCCCATGCTGTGGCGACGGCACCC
AGGGCATCCTCTGTTGCTGGAGTCGCATTTCGCCGGCCAGATGGCCGCCGTCGCCGGACAGTGGGCGAAGAAGCCGCTGC
TGTCGCGGGAAGGCGCCAACGTTTCCCGTCTGGAAGACGGCCGCCAGCAGAGCCTGAGCGGCAGCCACCATCTCGATCTG
TACGACGAATCCGGCTACGTGCTGCAGCGCTGGGTGGATCTGCCGGTGTTCGACGGGCTGCGCGCCTGCGTCGGCGCCTG
GGTGGTCAACGACCTGCCGGCCGGCATCGGCATCCGCGAGGAGCGCAGCCAGGTGACCGGCAACGGCGCCTTGTTCATTC
CCCATTTTTTCGAGTAG

Upstream 100 bases:

>100_bases
CCGGCTCGCATGCCAGCTTCCGCGCCGGCACGCCCACCCGCAGCGGCCTGTTCGGCCACACGGCGGCCCGGGCTTCCGGT
TTTTCGTTCGGAGGCTAGCG

Downstream 100 bases:

>100_bases
ACCATGACCATCATCGATGTAGACAGCTTTTCCCTGTTCGCCCTGCACTTCGCCTCCGGCGCGCTGATGCTGCTGGCCTT
CACCTGGCTGTACGGCCGCC

Product: synthetase/amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MERITVPKRDDWQARCEEDGFSIHSIDGLYWNEGYAFRFSGAEIDALDDATAELHAMCLDLVADVVQRGHYQDYGLSDEA
IALAESSWRSHQPSLYGRFDLAYDGRSIKLLEYNADTPTGLLESSVIQWRWLTDLGLPDQFNSIHEKLIDGWRRLLFAHP
SSLHFAASQCAGAEDWDTLHYLLDTALQAGCQRASSLNIEDIGEREGWLVDSRGEPIQALFKLYPFEWLAAECGDALAST
PTRLLEPAWKLLLSTKAILPMLWRRHPGHPLLLESHFAGQMAAVAGQWAKKPLLSREGANVSRLEDGRQQSLSGSHHLDL
YDESGYVLQRWVDLPVFDGLRACVGAWVVNDLPAGIGIREERSQVTGNGALFIPHFFE

Sequences:

>Translated_378_residues
MERITVPKRDDWQARCEEDGFSIHSIDGLYWNEGYAFRFSGAEIDALDDATAELHAMCLDLVADVVQRGHYQDYGLSDEA
IALAESSWRSHQPSLYGRFDLAYDGRSIKLLEYNADTPTGLLESSVIQWRWLTDLGLPDQFNSIHEKLIDGWRRLLFAHP
SSLHFAASQCAGAEDWDTLHYLLDTALQAGCQRASSLNIEDIGEREGWLVDSRGEPIQALFKLYPFEWLAAECGDALAST
PTRLLEPAWKLLLSTKAILPMLWRRHPGHPLLLESHFAGQMAAVAGQWAKKPLLSREGANVSRLEDGRQQSLSGSHHLDL
YDESGYVLQRWVDLPVFDGLRACVGAWVVNDLPAGIGIREERSQVTGNGALFIPHFFE
>Mature_378_residues
MERITVPKRDDWQARCEEDGFSIHSIDGLYWNEGYAFRFSGAEIDALDDATAELHAMCLDLVADVVQRGHYQDYGLSDEA
IALAESSWRSHQPSLYGRFDLAYDGRSIKLLEYNADTPTGLLESSVIQWRWLTDLGLPDQFNSIHEKLIDGWRRLLFAHP
SSLHFAASQCAGAEDWDTLHYLLDTALQAGCQRASSLNIEDIGEREGWLVDSRGEPIQALFKLYPFEWLAAECGDALAST
PTRLLEPAWKLLLSTKAILPMLWRRHPGHPLLLESHFAGQMAAVAGQWAKKPLLSREGANVSRLEDGRQQSLSGSHHLDL
YDESGYVLQRWVDLPVFDGLRACVGAWVVNDLPAGIGIREERSQVTGNGALFIPHFFE

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=390, Percent_Identity=40.2564102564103, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1790629, Length=396, Percent_Identity=38.8888888888889, Blast_Score=231, Evalue=5e-62,
Organism=Escherichia coli, GI1789361, Length=366, Percent_Identity=24.3169398907104, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 42447; Mature: 42447

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERITVPKRDDWQARCEEDGFSIHSIDGLYWNEGYAFRFSGAEIDALDDATAELHAMCLD
CCCCCCCCCCCHHHHHCCCCCEEEEECCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHH
LVADVVQRGHYQDYGLSDEAIALAESSWRSHQPSLYGRFDLAYDGRSIKLLEYNADTPTG
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCH
LLESSVIQWRWLTDLGLPDQFNSIHEKLIDGWRRLLFAHPSSLHFAASQCAGAEDWDTLH
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHH
YLLDTALQAGCQRASSLNIEDIGEREGWLVDSRGEPIQALFKLYPFEWLAAECGDALAST
HHHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCC
PTRLLEPAWKLLLSTKAILPMLWRRHPGHPLLLESHFAGQMAAVAGQWAKKPLLSREGAN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
VSRLEDGRQQSLSGSHHLDLYDESGYVLQRWVDLPVFDGLRACVGAWVVNDLPAGIGIRE
HHHHHCCHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCH
ERSQVTGNGALFIPHFFE
HHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MERITVPKRDDWQARCEEDGFSIHSIDGLYWNEGYAFRFSGAEIDALDDATAELHAMCLD
CCCCCCCCCCCHHHHHCCCCCEEEEECCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHH
LVADVVQRGHYQDYGLSDEAIALAESSWRSHQPSLYGRFDLAYDGRSIKLLEYNADTPTG
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCH
LLESSVIQWRWLTDLGLPDQFNSIHEKLIDGWRRLLFAHPSSLHFAASQCAGAEDWDTLH
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHH
YLLDTALQAGCQRASSLNIEDIGEREGWLVDSRGEPIQALFKLYPFEWLAAECGDALAST
HHHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCC
PTRLLEPAWKLLLSTKAILPMLWRRHPGHPLLLESHFAGQMAAVAGQWAKKPLLSREGAN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
VSRLEDGRQQSLSGSHHLDLYDESGYVLQRWVDLPVFDGLRACVGAWVVNDLPAGIGIRE
HHHHHCCHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCH
ERSQVTGNGALFIPHFFE
HHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]