| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496975
Identifier: 34496975
GI number: 34496975
Start: 1626493
End: 1627323
Strand: Reverse
Name: 34496975
Synonym: CV_1520
Alternate gene names: NA
Gene position: 1627323-1626493 (Counterclockwise)
Preceding gene: 34496979
Following gene: 34496972
Centisome position: 34.25
GC content: 69.55
Gene sequence:
>831_bases ATGCTGGCCTCCCGTCTCCACCCGGCCAAGCATGCCGCCTCGCCGATCGGCCCGACAGTGCCGTTAGTCATGTCCGCCGC TTCTATCTTCCGGCACATGCGCGCCCCGCGCCGGCCCGCCGACAATGCGGCATCCGGCCACACGGCCATCCACCCGAGAA AGGACGACAAGATGAAACGGCATTCCGCCCTGGCCGCCTTGGCCCTGCTGTCGCTGTACCTTCCCGCCGCCCGCGCCGCC GATAGCTTCGGCTACGGCAAGATCGGCACCGGCGCCGAACTGGGCGTCGGCTACGCGCTGAGCGACGATCTGGACTTCCG CGTCGGCATCGCCGATACCTTCCGCTACCGGCAGGACAAGAGCCTGGACGGCTCGTCCTATCAGCTGAAATCCCGGGCCA ACCCCGGGCTGGCGGCCAGCCTGGACTGGCGGCCGGCGCGCGGCAGCGGCTTCCGCCTGACCGGCGGACTGCTGCTGTCC GGCAAGCCGCGGGACGATCTGGCGTTTTCCGCCAACGGCGCGGGCAACTACACCCTAAACGGCAACGCCTACGCCGCATC GGCCGTGGGTCCGTTGAGCGGCAAGGTGGAATATCGGCAATTGGGCGCCTATCTGGGCGCGGGCTGGGATTTCACGCTGC CGGAGGCGCCTCGCTGGCGCGTCACCACGGATCTGGGCGCGCAGCTGCGCTTCGGCGGCAAAACCACGTTGAATCCGGCC GGCGGCATCGCCGCGGCGGACCTGGCCGCGGCGCAGCAGAAGCTGGACCACGACCTGGGCGGCACCCGCTTCCGACTCAG CGCAGGCGTGGGCTTGAGTTACGCGTTCTGA
Upstream 100 bases:
>100_bases GACAGCGTAGCACAAGGCCAGACCGATGCCGCCGGCATCCCTTCCCATTTCCCACCCGGCGCGCGCCAGCGGGCGCGCCG CCCATCTCAAGCCATCCAGC
Downstream 100 bases:
>100_bases CGCGGAAAAGGCCTGCGCCGCGGATGGCGCAGGCCTCTTTACCCGGCCAGCCGGGTTTCAGAGCGCGTACTGGCCCGGCT GGTAGCCGCCCGCCGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLASRLHPAKHAASPIGPTVPLVMSAASIFRHMRAPRRPADNAASGHTAIHPRKDDKMKRHSALAALALLSLYLPAARAA DSFGYGKIGTGAELGVGYALSDDLDFRVGIADTFRYRQDKSLDGSSYQLKSRANPGLAASLDWRPARGSGFRLTGGLLLS GKPRDDLAFSANGAGNYTLNGNAYAASAVGPLSGKVEYRQLGAYLGAGWDFTLPEAPRWRVTTDLGAQLRFGGKTTLNPA GGIAAADLAAAQQKLDHDLGGTRFRLSAGVGLSYAF
Sequences:
>Translated_276_residues MLASRLHPAKHAASPIGPTVPLVMSAASIFRHMRAPRRPADNAASGHTAIHPRKDDKMKRHSALAALALLSLYLPAARAA DSFGYGKIGTGAELGVGYALSDDLDFRVGIADTFRYRQDKSLDGSSYQLKSRANPGLAASLDWRPARGSGFRLTGGLLLS GKPRDDLAFSANGAGNYTLNGNAYAASAVGPLSGKVEYRQLGAYLGAGWDFTLPEAPRWRVTTDLGAQLRFGGKTTLNPA GGIAAADLAAAQQKLDHDLGGTRFRLSAGVGLSYAF >Mature_276_residues MLASRLHPAKHAASPIGPTVPLVMSAASIFRHMRAPRRPADNAASGHTAIHPRKDDKMKRHSALAALALLSLYLPAARAA DSFGYGKIGTGAELGVGYALSDDLDFRVGIADTFRYRQDKSLDGSSYQLKSRANPGLAASLDWRPARGSGFRLTGGLLLS GKPRDDLAFSANGAGNYTLNGNAYAASAVGPLSGKVEYRQLGAYLGAGWDFTLPEAPRWRVTTDLGAQLRFGGKTTLNPA GGIAAADLAAAQQKLDHDLGGTRFRLSAGVGLSYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29008; Mature: 29008
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASRLHPAKHAASPIGPTVPLVMSAASIFRHMRAPRRPADNAASGHTAIHPRKDDKMKR CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHH HSALAALALLSLYLPAARAADSFGYGKIGTGAELGVGYALSDDLDFRVGIADTFRYRQDK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEECCCCCEEEEHHHHHHHCCCC SLDGSSYQLKSRANPGLAASLDWRPARGSGFRLTGGLLLSGKPRDDLAFSANGAGNYTLN CCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEECCEEECCCCCCCEEEECCCCCCEEEC GNAYAASAVGPLSGKVEYRQLGAYLGAGWDFTLPEAPRWRVTTDLGAQLRFGGKTTLNPA CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC GGIAAADLAAAQQKLDHDLGGTRFRLSAGVGLSYAF CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECC >Mature Secondary Structure MLASRLHPAKHAASPIGPTVPLVMSAASIFRHMRAPRRPADNAASGHTAIHPRKDDKMKR CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHH HSALAALALLSLYLPAARAADSFGYGKIGTGAELGVGYALSDDLDFRVGIADTFRYRQDK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEECCCCCEEEEHHHHHHHCCCC SLDGSSYQLKSRANPGLAASLDWRPARGSGFRLTGGLLLSGKPRDDLAFSANGAGNYTLN CCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEECCEEECCCCCCCEEEECCCCCCEEEC GNAYAASAVGPLSGKVEYRQLGAYLGAGWDFTLPEAPRWRVTTDLGAQLRFGGKTTLNPA CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC GGIAAADLAAAQQKLDHDLGGTRFRLSAGVGLSYAF CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA