| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496927
Identifier: 34496927
GI number: 34496927
Start: 1569417
End: 1569848
Strand: Reverse
Name: 34496927
Synonym: CV_1472
Alternate gene names: NA
Gene position: 1569848-1569417 (Counterclockwise)
Preceding gene: 34496936
Following gene: 34496926
Centisome position: 33.04
GC content: 51.85
Gene sequence:
>432_bases TTGATACATCCATCGACTGACAGAAAACGGTTTCGAGGCACGCCCGGCAAATCGGGCGCAGCCGCCGGATGCTGGAGCGA ACGCCCGAAAAGCCGCCTGCGTGGGATTGCATCGGATTGGGATACCCATGCCTTTATGATCGTCTCGGCTCAAGACCAGA CGAATGGAGATAACGCGGGTTTCGAAGGACAAAATAACGCCAGGCAACCGGCGCAATCCCTCTCCCGCTATCGATACAAG CAATCGGCCTCTCGAAATTACAGCGCCGTTATGGCGGATACGCCGAATCGGAAAATCGTATTGCCGATTTTAGGGGCTAC GCCCTTCCAATTGCCCGATTTAAAGATGAATAAATTGTTTTTGATATTACGACGCGTTCTCACTCGCACACTCATGGAGA TTATATTCTCTCGCGCAAACCATGCCGATTGA
Upstream 100 bases:
>100_bases GTGCGGGAGCAGGTTCGCGATCGTTTCCAGCAACGCTCGTTTTCTACAGATCGGGAGCTAGACAATGCCTCACGGCAACA TCATTCGCCGTCAGGATGGT
Downstream 100 bases:
>100_bases ATAATGAAATCATACCAAGACATATCGCATTGTAAAAAGAAAAATGTGCACTTATAAAGCGTCATTGCGTCAGGAAAAAC CGCTCGAAATTGGTCAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MIHPSTDRKRFRGTPGKSGAAAGCWSERPKSRLRGIASDWDTHAFMIVSAQDQTNGDNAGFEGQNNARQPAQSLSRYRYK QSASRNYSAVMADTPNRKIVLPILGATPFQLPDLKMNKLFLILRRVLTRTLMEIIFSRANHAD
Sequences:
>Translated_143_residues MIHPSTDRKRFRGTPGKSGAAAGCWSERPKSRLRGIASDWDTHAFMIVSAQDQTNGDNAGFEGQNNARQPAQSLSRYRYK QSASRNYSAVMADTPNRKIVLPILGATPFQLPDLKMNKLFLILRRVLTRTLMEIIFSRANHAD >Mature_143_residues MIHPSTDRKRFRGTPGKSGAAAGCWSERPKSRLRGIASDWDTHAFMIVSAQDQTNGDNAGFEGQNNARQPAQSLSRYRYK QSASRNYSAVMADTPNRKIVLPILGATPFQLPDLKMNKLFLILRRVLTRTLMEIIFSRANHAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16049; Mature: 16049
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPSTDRKRFRGTPGKSGAAAGCWSERPKSRLRGIASDWDTHAFMIVSAQDQTNGDNAG CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC FEGQNNARQPAQSLSRYRYKQSASRNYSAVMADTPNRKIVLPILGATPFQLPDLKMNKLF CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHH LILRRVLTRTLMEIIFSRANHAD HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIHPSTDRKRFRGTPGKSGAAAGCWSERPKSRLRGIASDWDTHAFMIVSAQDQTNGDNAG CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC FEGQNNARQPAQSLSRYRYKQSASRNYSAVMADTPNRKIVLPILGATPFQLPDLKMNKLF CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHH LILRRVLTRTLMEIIFSRANHAD HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA