| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pht4 [H]
Identifier: 34496862
GI number: 34496862
Start: 1481596
End: 1482648
Strand: Reverse
Name: pht4 [H]
Synonym: CV_1407
Alternate gene names: 34496862
Gene position: 1482648-1481596 (Counterclockwise)
Preceding gene: 34496863
Following gene: 34496861
Centisome position: 31.21
GC content: 65.62
Gene sequence:
>1053_bases ATGAGCTTGATCAAGGTTGGCCTTGTCGGCATCGGCGCGCAGATGCAGGAAAACCTGCTGCCGTCTCTTCTGCAGATGCA GGACATACGGATCGTCGCCGCGTGCGACAGCGATCTGGAACGGGCGCGGCGCGTCCACCGCTTCATTTCCGACATCCCGG TGCTCGACAACGTGCCGGCCATGCTGAACCAGGTCCCGCTGGACGCGGTGGTGATGGCGGGCCCGCCGCAGCTGCACTTC GAAATGGGGCTGCTGGCGATGAGCAAGGGCGTCAACGTGTTCGTCGAAAAACCGCCGTGCGCGACGCTGGAGGAGCTGGA AACGCTGATCGATGCCGCGCGCCGCAGCGACGTGGTATCCGGCGTGGGCATGAACTTCAAGTTCGCCCGCCCGGTGCGCC AACTGCGCGAGATGACCCAGGTGGACGAATTCGGCGAGACCCTGCACATCCAGCTCAACCACTACGCCAACAAACCGCGC GCCCCGCTGTGGGGGCTGGACTCCACGCTGCGCTCCTTCCTGCTGGCGCAGGCCATCCACACGATAGACCTGGCCATCAC CTTCGGCGACGGCGAGCTGCGCCGCGTGCAATCCAGCGTGCAGCGCCACGACGACGCGCTGATCGTCAAGGCAGACATGG CCTTCTCATCCGGCGCCACCGCCAGTCTGCTGGCCGGAACCAGCTTCCCTTATTTCGAGTTCGACATGAAGCTGGTCAGT TCCAGCTCCACGCTGGTGGAGCTCGACAACCTGTGGAACATCACGCTGCACGAACCCGAACACGCGACCCGCCCCACCGG CGCGGCCAAGCGCTGGCGCGGCGCCTGGCAGCCTGGGCCGCTGGACTCCGGCTACGAGCGCAGCGGCTACCACGGCGAGT TGCACCAGTTCTTCCAGGCGATACGCGAGCACCGCCGCTTCGAGGCGGACTTCGCCAGCCTGCTGCCCACCTACCGCGTG ATCGAGGAAATCTGCTCGGCCGACGCCGTGGCCCAGGGCCTGCAAAACGCCCATAGCCGGATACGCACCGGCATCGAATC TCTGTCGCTGTAA
Upstream 100 bases:
>100_bases CGGCCATGCGCTGATCCTTGCGCAGGGCTGAGGCTTTTCATCAATCCAGAGCAACACGGGCACGCCGCGCCTGGCGCGGG GCCGGTCATGGAGATTCACG
Downstream 100 bases:
>100_bases CCGAACGGGAGTCCTCCATGACCGCAACCATCGCCGCGGCCCAGACCGCCGGCCGCGTGATCTCCGACAAATACCGTCCG CAATACCCGGACGATCTCCC
Product: dehydrogenase
Products: NA
Alternate protein names: DHP dehydrogenase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF EMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKPR APLWGLDSTLRSFLLAQAIHTIDLAITFGDGELRRVQSSVQRHDDALIVKADMAFSSGATASLLAGTSFPYFEFDMKLVS SSSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGELHQFFQAIREHRRFEADFASLLPTYRV IEEICSADAVAQGLQNAHSRIRTGIESLSL
Sequences:
>Translated_350_residues MSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF EMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKPR APLWGLDSTLRSFLLAQAIHTIDLAITFGDGELRRVQSSVQRHDDALIVKADMAFSSGATASLLAGTSFPYFEFDMKLVS SSSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGELHQFFQAIREHRRFEADFASLLPTYRV IEEICSADAVAQGLQNAHSRIRTGIESLSL >Mature_349_residues SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFE MGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKPRA PLWGLDSTLRSFLLAQAIHTIDLAITFGDGELRRVQSSVQRHDDALIVKADMAFSSGATASLLAGTSFPYFEFDMKLVSS SSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGELHQFFQAIREHRRFEADFASLLPTYRVI EEICSADAVAQGLQNAHSRIRTGIESLSL
Specific function: Transforms 4,5-dihydro-4,5-dihydroxyphthalate to 4,5- dihydroxyphthalate [H]
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787574, Length=189, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38883; Mature: 38752
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPA CCEEEEHHHHCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHCCCCCCCCHH MLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVS HHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH GVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKPRAPLWGLDSTLRSFLLAQAIH CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH TIDLAITFGDGELRRVQSSVQRHDDALIVKADMAFSSGATASLLAGTSFPYFEFDMKLVS HEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHC SSSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGELHQFFQA CCCCEEEECCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IREHRRFEADFASLLPTYRVIEEICSADAVAQGLQNAHSRIRTGIESLSL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPA CEEEEHHHHCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHCCCCCCCCHH MLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVS HHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH GVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKPRAPLWGLDSTLRSFLLAQAIH CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH TIDLAITFGDGELRRVQSSVQRHDDALIVKADMAFSSGATASLLAGTSFPYFEFDMKLVS HEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHC SSSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGELHQFFQA CCCCEEEECCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IREHRRFEADFASLLPTYRVIEEICSADAVAQGLQNAHSRIRTGIESLSL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA