| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496835
Identifier: 34496835
GI number: 34496835
Start: 1456071
End: 1457366
Strand: Direct
Name: 34496835
Synonym: CV_1380
Alternate gene names: NA
Gene position: 1456071-1457366 (Clockwise)
Preceding gene: 34496829
Following gene: 34496836
Centisome position: 30.65
GC content: 72.07
Gene sequence:
>1296_bases CTGCGCGCCGCGCGCCCGCAGGCGGAGACGACGGTGGCCGCCTTGCAGCAGCTGGACGCCGCGCTGCTGCGGCCGGATTC GCTGTACCCGGCGCTGGGCCAGCTTCCCCTTGTCCAATTGCAGGCGCTGTATCGCCACCGCGGCCAGTGCCGCGCGCCGT GGCCGGCGCTGCCGGCCGATGTATTGCGTTTCGAGCGCGCGCTGTGCGATGGCGAGGCGCTGCCGCCGGCCTGGTTCGCC GCCCATCCCATCCATCCGCTGGGCGGCAGCTATGCCTGGCATTATCTACAGCGCCATCCGGAATCGGCACCCGCGCTGCA GCCTTATCTGCACCTCCGGGAACGGCCGGCGGCTTTTGCCGGCATCGGCAAGCTGGGCGACGACAACCTGGCCGCGCTGC TGTCCGGCGAGCGCTGGCTGCTGGATGGCGGCGATCTGTGGTGGCGCGACGGCGCGTCCTGGCGACGCTATGGCGCGGAA CAATGGCGGCCGCTGGCGGAGGCGGCCGGGCTGGCGCTGAGCCCATTGGCCGACGGCGACGCCTGCCCGCAACCGTTGGG CCGGATCTGCGCGCGGCCGCTGCCGCCGTCGCCGCGTTGGTGGCGGTCGCTGGCCGGCGTTTCGCTGCTGGCGGCGGCCG GCATGCTGGCTTACGGCTGGCTGCAGCGCCGCCGGCTGGAGCGGGAGCGGCGCTTTGTGCTGCAGATGCTCACCCACGAG CTGCGCACGCCCATCGCCGGGCTGGGCAATGTGGTGGAAGACTTCCGCGCCGGTTTCGATCAATTGCCGGCCGGCGCGCA GCAAGGCTTCGGCCGGCTGGCCGACGGCGTGCTGCGGCTGCGCCAGCTGGCCGATGCCAGCCGGCATTATCTGGCGGCGG ACAGCCGGCTGGAAGCGCCGCAGCCGCTGCCTTTGGCTGCTTGGCTGGATAGCGTCGCGGAACGCCACGGTGCGGCTTAC TGTCTGGATCAGGATAGAAAGCTGAACCTGCCGGTCTACTGGCTGGGCCTGTGCCTGGACAATCTGCTGCGCAACGCGCG CCAGCACGGCCGGCCGCCGGTGCGCATCCTGGCCAGCTGGAAAAACGGCCGGCTGCGGCTGGCGGTCAGCGACGGCGGCG CGCTGCCGCGCTACCGCTTGTCGCTGTTGCGGCGCGAGCTGGGCGCCAGCGCCGGCATGGGGCTGGGCCTGGCCATCGTG CGGCGGGTGATGGCCAGGCTGGGCGGCCGGCTGACGCTGGAAGGGCCGCCGACCACATTCGCGCTGGAGTTGCCGTGTGA CGATATTGCTGATTGA
Upstream 100 bases:
>100_bases CCGCCGGCCTTATAATCCAGCCATGCCGCGCCTTCTCGCCCTGTTTTTGATCGCCCTGAGCCTGCACGCCCGCGCCGACG TCGCCGCGCTGCAGGCCGCG
Downstream 100 bases:
>100_bases AGACGACGCCGAACTGGGCGCGGGCCTGCGCCAATTCCTGCAGCAGCAGGGCTACGACTGCCTGTGGCTGCGCGACGGCG GCGAAGTGGCCGCCCACTGG
Product: sensor histidine kinase
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase; Two Component Sensor Histidine Kinase
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRAARPQAETTVAALQQLDAALLRPDSLYPALGQLPLVQLQALYRHRGQCRAPWPALPADVLRFERALCDGEALPPAWFA AHPIHPLGGSYAWHYLQRHPESAPALQPYLHLRERPAAFAGIGKLGDDNLAALLSGERWLLDGGDLWWRDGASWRRYGAE QWRPLAEAAGLALSPLADGDACPQPLGRICARPLPPSPRWWRSLAGVSLLAAAGMLAYGWLQRRRLERERRFVLQMLTHE LRTPIAGLGNVVEDFRAGFDQLPAGAQQGFGRLADGVLRLRQLADASRHYLAADSRLEAPQPLPLAAWLDSVAERHGAAY CLDQDRKLNLPVYWLGLCLDNLLRNARQHGRPPVRILASWKNGRLRLAVSDGGALPRYRLSLLRRELGASAGMGLGLAIV RRVMARLGGRLTLEGPPTTFALELPCDDIAD
Sequences:
>Translated_431_residues MRAARPQAETTVAALQQLDAALLRPDSLYPALGQLPLVQLQALYRHRGQCRAPWPALPADVLRFERALCDGEALPPAWFA AHPIHPLGGSYAWHYLQRHPESAPALQPYLHLRERPAAFAGIGKLGDDNLAALLSGERWLLDGGDLWWRDGASWRRYGAE QWRPLAEAAGLALSPLADGDACPQPLGRICARPLPPSPRWWRSLAGVSLLAAAGMLAYGWLQRRRLERERRFVLQMLTHE LRTPIAGLGNVVEDFRAGFDQLPAGAQQGFGRLADGVLRLRQLADASRHYLAADSRLEAPQPLPLAAWLDSVAERHGAAY CLDQDRKLNLPVYWLGLCLDNLLRNARQHGRPPVRILASWKNGRLRLAVSDGGALPRYRLSLLRRELGASAGMGLGLAIV RRVMARLGGRLTLEGPPTTFALELPCDDIAD >Mature_431_residues MRAARPQAETTVAALQQLDAALLRPDSLYPALGQLPLVQLQALYRHRGQCRAPWPALPADVLRFERALCDGEALPPAWFA AHPIHPLGGSYAWHYLQRHPESAPALQPYLHLRERPAAFAGIGKLGDDNLAALLSGERWLLDGGDLWWRDGASWRRYGAE QWRPLAEAAGLALSPLADGDACPQPLGRICARPLPPSPRWWRSLAGVSLLAAAGMLAYGWLQRRRLERERRFVLQMLTHE LRTPIAGLGNVVEDFRAGFDQLPAGAQQGFGRLADGVLRLRQLADASRHYLAADSRLEAPQPLPLAAWLDSVAERHGAAY CLDQDRKLNLPVYWLGLCLDNLLRNARQHGRPPVRILASWKNGRLRLAVSDGGALPRYRLSLLRRELGASAGMGLGLAIV RRVMARLGGRLTLEGPPTTFALELPCDDIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47530; Mature: 47530
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARPQAETTVAALQQLDAALLRPDSLYPALGQLPLVQLQALYRHRGQCRAPWPALPAD CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCHH VLRFERALCDGEALPPAWFAAHPIHPLGGSYAWHYLQRHPESAPALQPYLHLRERPAAFA HHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHH GIGKLGDDNLAALLSGERWLLDGGDLWWRDGASWRRYGAEQWRPLAEAAGLALSPLADGD HCCCCCCCCHHHHHCCCEEEEECCCEEECCCCHHHHCCHHHHHHHHHHCCCEECCCCCCC ACPQPLGRICARPLPPSPRWWRSLAGVSLLAAAGMLAYGWLQRRRLERERRFVLQMLTHE CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTPIAGLGNVVEDFRAGFDQLPAGAQQGFGRLADGVLRLRQLADASRHYLAADSRLEAP HHCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QPLPLAAWLDSVAERHGAAYCLDQDRKLNLPVYWLGLCLDNLLRNARQHGRPPVRILASW CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC KNGRLRLAVSDGGALPRYRLSLLRRELGASAGMGLGLAIVRRVMARLGGRLTLEGPPTTF CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEE ALELPCDDIAD EEECCCHHCCC >Mature Secondary Structure MRAARPQAETTVAALQQLDAALLRPDSLYPALGQLPLVQLQALYRHRGQCRAPWPALPAD CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCHH VLRFERALCDGEALPPAWFAAHPIHPLGGSYAWHYLQRHPESAPALQPYLHLRERPAAFA HHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHH GIGKLGDDNLAALLSGERWLLDGGDLWWRDGASWRRYGAEQWRPLAEAAGLALSPLADGD HCCCCCCCCHHHHHCCCEEEEECCCEEECCCCHHHHCCHHHHHHHHHHCCCEECCCCCCC ACPQPLGRICARPLPPSPRWWRSLAGVSLLAAAGMLAYGWLQRRRLERERRFVLQMLTHE CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTPIAGLGNVVEDFRAGFDQLPAGAQQGFGRLADGVLRLRQLADASRHYLAADSRLEAP HHCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QPLPLAAWLDSVAERHGAAYCLDQDRKLNLPVYWLGLCLDNLLRNARQHGRPPVRILASW CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC KNGRLRLAVSDGGALPRYRLSLLRRELGASAGMGLGLAIVRRVMARLGGRLTLEGPPTTF CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEE ALELPCDDIAD EEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA