| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496827
Identifier: 34496827
GI number: 34496827
Start: 1445161
End: 1445571
Strand: Direct
Name: 34496827
Synonym: CV_1372
Alternate gene names: NA
Gene position: 1445161-1445571 (Clockwise)
Preceding gene: 34496826
Following gene: 34496828
Centisome position: 30.42
GC content: 59.12
Gene sequence:
>411_bases ATGAAAACACCGATCGCCAGCCTGCTGGCCATCCTGAGCCTTCCCGCCGCCGCGTGCAGCCTTCCCCAGCAGTTGGACGG CAAAACGTTCATCAATGTGGCGGACCCGGCGTTCTCGCCCGGCAATCCCAACGCGGGGACCATCATGAAGCTGAGATTTT CGAAAGACGACTATGAGAACAAGATCCTGACCCGAAACCTGGTCGTCCACGGGCAGTACCGGTATCGCAGGCTTCATGAC ACGGTCGGTTTCGTTGAGGCCAGCGAAAACTATGGCGGGCAGCCCACCCGCTACACGCTGGTGTTGACCTGCTTGAACGA CTATTCCGGCACCGCGGTGTTTACCCAAACGCAGGGCGCCGTTCCACCGGACAACCGCCAGAACACGGTGCGCTACACGA TAGAACAATAA
Upstream 100 bases:
>100_bases TGCCGGGCAAGAGTTTCCAGTACTAAAACCTTCGGCATCAAGCCGCCCGTGGCGCGCCGAGCCGGCGCGCTCCCTTTTGC CAACGCCATGGAGTCCATCA
Downstream 100 bases:
>100_bases CGGACCCGAGCGCGGCATGGGCGATGCCAGCCGCCGGCCGGCGGCTGGATGCGGGCAGACGGGATAATTCGCCGATGCCG CGGGCGACGCCTGATCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKTPIASLLAILSLPAAACSLPQQLDGKTFINVADPAFSPGNPNAGTIMKLRFSKDDYENKILTRNLVVHGQYRYRRLHD TVGFVEASENYGGQPTRYTLVLTCLNDYSGTAVFTQTQGAVPPDNRQNTVRYTIEQ
Sequences:
>Translated_136_residues MKTPIASLLAILSLPAAACSLPQQLDGKTFINVADPAFSPGNPNAGTIMKLRFSKDDYENKILTRNLVVHGQYRYRRLHD TVGFVEASENYGGQPTRYTLVLTCLNDYSGTAVFTQTQGAVPPDNRQNTVRYTIEQ >Mature_136_residues MKTPIASLLAILSLPAAACSLPQQLDGKTFINVADPAFSPGNPNAGTIMKLRFSKDDYENKILTRNLVVHGQYRYRRLHD TVGFVEASENYGGQPTRYTLVLTCLNDYSGTAVFTQTQGAVPPDNRQNTVRYTIEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15039; Mature: 15039
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPIASLLAILSLPAAACSLPQQLDGKTFINVADPAFSPGNPNAGTIMKLRFSKDDYEN CCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCC KILTRNLVVHGQYRYRRLHDTVGFVEASENYGGQPTRYTLVLTCLNDYSGTAVFTQTQGA EEEEEEEEEECCHHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC VPPDNRQNTVRYTIEQ CCCCCCCCEEEEEECC >Mature Secondary Structure MKTPIASLLAILSLPAAACSLPQQLDGKTFINVADPAFSPGNPNAGTIMKLRFSKDDYEN CCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCC KILTRNLVVHGQYRYRRLHDTVGFVEASENYGGQPTRYTLVLTCLNDYSGTAVFTQTQGA EEEEEEEEEECCHHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCC VPPDNRQNTVRYTIEQ CCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA