Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is tap [C]

Identifier: 34496813

GI number: 34496813

Start: 1429133

End: 1430932

Strand: Direct

Name: tap [C]

Synonym: CV_1358

Alternate gene names: 34496813

Gene position: 1429133-1430932 (Clockwise)

Preceding gene: 34496812

Following gene: 34496817

Centisome position: 30.08

GC content: 64.44

Gene sequence:

>1800_bases
ATGGAGTGGTTCTGGCGGTTGTACACGGTCTCGGAAAAGACTTTCTGGAACACGCTGAGCAAGAAACTGTGCAGTTTCTT
CTTCATCAGCCTGTTCCAGCTGCTGATGGTGGCCTACAGCTACCATGCCTTGTCCGACATCCGTTCCAGCCTGCGCGGCG
CGGGGGTGTCGCCGCAGGTGATGGCCGGCGTCGAGGCCAGCATAGACAGCGCGCTCTACTGGACGCTGGGCTTGTGGCTG
CTGAGCTTCGTTTTCATCGCCTTCATGGTCTGGTATCTGCGCTACCTGATCGTGCGGCCGCTGCGCATGATCATCCAGAT
CTTCAACGAGATCGGCGCCGGCGCCGGCGACCTGTCGCGCGAGATTCCCACCATCACCTACGACGAGATCCGCGACCTGT
CGCTGTCCTATAACCGCTTCCTGCTGAAGATGCGGGAGATCATCAGCAATGTGAGGCTGATGACGGTGCGCATCGCGATG
GATTCGGCGGTGACGCGGCGCAATGTCACCGAGTCGCTGGGCAGCGCGCGCCAGCAGGATGATCTGGCCAAACAGGTGCG
TCAGGCCAGCGACGATTCGACGCGCGGAGTAGGCCTGGTCACCGAGCAGACCGAGGCCATCTCCGCCACCACCGCCGAGA
ACCTGCAGGTGGCGCGAGACTCCTACCAGGAGCTGCGCTCGGTCACCGACAGCATCCACGACATCAGCCGCAAAGTCGGC
CATTTCAACCACACGGTGGAGGACCTGAGCCAGCGCTCGGCCAGCATCAAGACCATCGTCGACCTGATCAAGGACGTGTC
CGAGCAGACCAATCTGCTGGCGCTTAACGCGGCGATCGAGGCGGCGCGCGCCGGCGAAAGCGGCCGCGGCTTCGCCGTGG
TGGCGGACGAGGTGCGCAAGCTGGCGGAGCGGGTGAAGACCGCGACTGACGAGATCTCGCACAATATCGACGGCATGCTG
GGCCTGGTGGCGAACACGCAGCAGGAAACCGAGGCCATCACCGCCGACACCAACCAGGCGCGGGATGTGATCTCGCGCGC
GTCCGAGCATTTCAGCAAGATGATGGGCGATTTCGAGGCGACGTCCAGCAGCCTGAGCCAGATCGCTGCCACCATGCACG
GCTTTGCCGACAGCAACCAGCAGGTCAACCGCAATGTCGCCGAGATCCATCAGCTGGGGCAGCTGGTGAACGGCCGCCTG
GGACAGACCGAAAAGGCGGCGACGGAGCTGACGGCGGCGGCGGAGCAGGTGCAGGAGCTGGTTTCCAAGTTCATCATCGG
CGACGGCGCCTTCGACCAGGCGGTGAACCGGGCGCGCGATGTCCGCGACCAGGTGCAGCAACTGCTGCAGGACGCGCAGC
AGGGCGGCCTGGATCTGTTCGATCAGCGCTACCAGCAGATCGCGGGCACCGCCCCGGCGAAATACCGCACCGCTTACGAC
GCCAAGCTGGAGAAGCTGCTGCAGCCGATGCTGGACGGCGTGGTAGGGCAGATTCCCGGCGGCAAGTTCTGCGTGGCGGT
GGACGGCAATGGCTACGCCCCCACGCACAACAGCTGGTACAGCAAGCCTCCGTCCGGCGATCCGGCCAAGGACCTGGTGG
AGAGCCGGGACAAGCGCATTTTCAACGACGCCGCCGGCTTGAGAGCGGCGCGCAATGTGCAGCCCTTCCTGTTGCAGACG
TATAGCCGCGATACCGGCGAGGTATTGTCCGAGGTGGTGCTGCCGCTGGAGCTGCGCGGCCGGCATTGGGGCGCATTGCG
CGTGGGTTTCGACCCGCACGCGTTGCTGGCGCGGGATTGA

Upstream 100 bases:

>100_bases
AAGTTTCCGAGCATGAATCGACTGGAAATTGCGGCGCGCATCGGAAAGAATAACGTCCTAATAAAAAATAGCGGCGGAAC
AGCCGGCAAGAGGAGAGCAA

Downstream 100 bases:

>100_bases
GTTCGGTGGAATGAAAAGAAAAAGGGAGGCCGCGGCCTCCCTTTTCCATGCGGGCTTACAGGGAGAGCGGCGTCATCAGC
GTGGCGATGCCCAGGCCGAC

Product: methyl-accepting chemotaxis protein IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MEWFWRLYTVSEKTFWNTLSKKLCSFFFISLFQLLMVAYSYHALSDIRSSLRGAGVSPQVMAGVEASIDSALYWTLGLWL
LSFVFIAFMVWYLRYLIVRPLRMIIQIFNEIGAGAGDLSREIPTITYDEIRDLSLSYNRFLLKMREIISNVRLMTVRIAM
DSAVTRRNVTESLGSARQQDDLAKQVRQASDDSTRGVGLVTEQTEAISATTAENLQVARDSYQELRSVTDSIHDISRKVG
HFNHTVEDLSQRSASIKTIVDLIKDVSEQTNLLALNAAIEAARAGESGRGFAVVADEVRKLAERVKTATDEISHNIDGML
GLVANTQQETEAITADTNQARDVISRASEHFSKMMGDFEATSSSLSQIAATMHGFADSNQQVNRNVAEIHQLGQLVNGRL
GQTEKAATELTAAAEQVQELVSKFIIGDGAFDQAVNRARDVRDQVQQLLQDAQQGGLDLFDQRYQQIAGTAPAKYRTAYD
AKLEKLLQPMLDGVVGQIPGGKFCVAVDGNGYAPTHNSWYSKPPSGDPAKDLVESRDKRIFNDAAGLRAARNVQPFLLQT
YSRDTGEVLSEVVLPLELRGRHWGALRVGFDPHALLARD

Sequences:

>Translated_599_residues
MEWFWRLYTVSEKTFWNTLSKKLCSFFFISLFQLLMVAYSYHALSDIRSSLRGAGVSPQVMAGVEASIDSALYWTLGLWL
LSFVFIAFMVWYLRYLIVRPLRMIIQIFNEIGAGAGDLSREIPTITYDEIRDLSLSYNRFLLKMREIISNVRLMTVRIAM
DSAVTRRNVTESLGSARQQDDLAKQVRQASDDSTRGVGLVTEQTEAISATTAENLQVARDSYQELRSVTDSIHDISRKVG
HFNHTVEDLSQRSASIKTIVDLIKDVSEQTNLLALNAAIEAARAGESGRGFAVVADEVRKLAERVKTATDEISHNIDGML
GLVANTQQETEAITADTNQARDVISRASEHFSKMMGDFEATSSSLSQIAATMHGFADSNQQVNRNVAEIHQLGQLVNGRL
GQTEKAATELTAAAEQVQELVSKFIIGDGAFDQAVNRARDVRDQVQQLLQDAQQGGLDLFDQRYQQIAGTAPAKYRTAYD
AKLEKLLQPMLDGVVGQIPGGKFCVAVDGNGYAPTHNSWYSKPPSGDPAKDLVESRDKRIFNDAAGLRAARNVQPFLLQT
YSRDTGEVLSEVVLPLELRGRHWGALRVGFDPHALLARD
>Mature_599_residues
MEWFWRLYTVSEKTFWNTLSKKLCSFFFISLFQLLMVAYSYHALSDIRSSLRGAGVSPQVMAGVEASIDSALYWTLGLWL
LSFVFIAFMVWYLRYLIVRPLRMIIQIFNEIGAGAGDLSREIPTITYDEIRDLSLSYNRFLLKMREIISNVRLMTVRIAM
DSAVTRRNVTESLGSARQQDDLAKQVRQASDDSTRGVGLVTEQTEAISATTAENLQVARDSYQELRSVTDSIHDISRKVG
HFNHTVEDLSQRSASIKTIVDLIKDVSEQTNLLALNAAIEAARAGESGRGFAVVADEVRKLAERVKTATDEISHNIDGML
GLVANTQQETEAITADTNQARDVISRASEHFSKMMGDFEATSSSLSQIAATMHGFADSNQQVNRNVAEIHQLGQLVNGRL
GQTEKAATELTAAAEQVQELVSKFIIGDGAFDQAVNRARDVRDQVQQLLQDAQQGGLDLFDQRYQQIAGTAPAKYRTAYD
AKLEKLLQPMLDGVVGQIPGGKFCVAVDGNGYAPTHNSWYSKPPSGDPAKDLVESRDKRIFNDAAGLRAARNVQPFLLQT
YSRDTGEVLSEVVLPLELRGRHWGALRVGFDPHALLARD

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=299, Percent_Identity=29.0969899665552, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI2367378, Length=265, Percent_Identity=30.9433962264151, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788195, Length=280, Percent_Identity=28.9285714285714, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787690, Length=353, Percent_Identity=27.7620396600567, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=27.3722627737226, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 66466; Mature: 66466

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA