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The map label for this gene is spvC [H]

Identifier: 34496763

GI number: 34496763

Start: 1378695

End: 1379420

Strand: Direct

Name: spvC [H]

Synonym: CV_1308

Alternate gene names: 34496763

Gene position: 1378695-1379420 (Clockwise)

Preceding gene: 34496762

Following gene: 34496764

Centisome position: 29.02

GC content: 52.07

Gene sequence:

>726_bases
ATGCCCATCAATCGAGCCGGTCTAAAACTAAGCCTCCCCTCTTTGAACGTTGGGCCGGTTTCTGAGAGGCCGCAGATGTC
TGCTACGAATGAGGATTTGAAAACCAATTTCCACAGCTTGCACAATCAAATGCGCCAGATGCCGATGTCGCACTTCAGAG
AGGCGCTGGATGCGCCCGACTACTCAGGAATGCGTCAAAGTGGCTTCTTCGCCATGAGCCAAGGTTTTCAGCTGGAGAGC
CATGGCGGCGATGTTTTCATGCATGCGCATCGAGAAAATCCTCAGTGCAAGGGCGATTTTGCCGGGGACAAATTCCACAT
CAGTGTGCAGCGGGAGCAGGTGCCGCAAGCATTTCAGGCGCTGTCGGGATTGTTGTTTTCAGTGGACAGTCCAATCGATA
AGTGGAAGGTGACCGATATGGAGCGGGTTGATCAGCAATCCCGTGTGGCCGTGGGCGCTCAATTCACCTTGTATGTAAAA
CCCGATCAGGAAAATTCGCAGTACAGTGCGTCGTCGCTCCACAATACACGGCAATTCATCGAGTGTCTGGAGTCCAGATT
ATCTGAAAGTGGGCTTATGCCTGGACAGTATCCCGAGTCGGACGTTCATCCTGAAAATTGGAAATATGTCAGTTACCGTA
ATGAGCTACGAAGCGGGCGTGACGGTGGCGAGATGCAGAGCCAAGCTTTACGAGAGGAACCGTTTTATCGTTTGATGGCG
GAGTGA

Upstream 100 bases:

>100_bases
TGAAAATGCAAGGTTTTTGGAGAGGTGATCGTTTCCTAAAAGAAAACTGGTGATCCATATGTGATAAGGACAATTTCCCA
TCTTGCAAAGGACGCCTCCC

Downstream 100 bases:

>100_bases
GTGCCGCGCGGATTCTGTCGTGGCGACGTGGCTGGGTTTGGCTTTTCCTGGATTGAACATAAGGGAAGCCGCTCAGCTGA
GCGTCACAGATTCATATTCA

Product: hydrophilic protein, virA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MPINRAGLKLSLPSLNVGPVSERPQMSATNEDLKTNFHSLHNQMRQMPMSHFREALDAPDYSGMRQSGFFAMSQGFQLES
HGGDVFMHAHRENPQCKGDFAGDKFHISVQREQVPQAFQALSGLLFSVDSPIDKWKVTDMERVDQQSRVAVGAQFTLYVK
PDQENSQYSASSLHNTRQFIECLESRLSESGLMPGQYPESDVHPENWKYVSYRNELRSGRDGGEMQSQALREEPFYRLMA
E

Sequences:

>Translated_241_residues
MPINRAGLKLSLPSLNVGPVSERPQMSATNEDLKTNFHSLHNQMRQMPMSHFREALDAPDYSGMRQSGFFAMSQGFQLES
HGGDVFMHAHRENPQCKGDFAGDKFHISVQREQVPQAFQALSGLLFSVDSPIDKWKVTDMERVDQQSRVAVGAQFTLYVK
PDQENSQYSASSLHNTRQFIECLESRLSESGLMPGQYPESDVHPENWKYVSYRNELRSGRDGGEMQSQALREEPFYRLMA
E
>Mature_240_residues
PINRAGLKLSLPSLNVGPVSERPQMSATNEDLKTNFHSLHNQMRQMPMSHFREALDAPDYSGMRQSGFFAMSQGFQLESH
GGDVFMHAHRENPQCKGDFAGDKFHISVQREQVPQAFQALSGLLFSVDSPIDKWKVTDMERVDQQSRVAVGAQFTLYVKP
DQENSQYSASSLHNTRQFIECLESRLSESGLMPGQYPESDVHPENWKYVSYRNELRSGRDGGEMQSQALREEPFYRLMAE

Specific function: Not known. This protein is involved in the virulence of salmonellas [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spvC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003519 [H]

Pfam domain/function: PF03536 VRP3 [H]

EC number: NA

Molecular weight: Translated: 27438; Mature: 27307

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPINRAGLKLSLPSLNVGPVSERPQMSATNEDLKTNFHSLHNQMRQMPMSHFREALDAPD
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
YSGMRQSGFFAMSQGFQLESHGGDVFMHAHRENPQCKGDFAGDKFHISVQREQVPQAFQA
CCCCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
LSGLLFSVDSPIDKWKVTDMERVDQQSRVAVGAQFTLYVKPDQENSQYSASSLHNTRQFI
HHHHHHHCCCCCCHHCCCCHHHHCHHHHEEECCEEEEEECCCCCCCCHHHHHHHHHHHHH
ECLESRLSESGLMPGQYPESDVHPENWKYVSYRNELRSGRDGGEMQSQALREEPFYRLMA
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHCCHHHHHC
E
C
>Mature Secondary Structure 
PINRAGLKLSLPSLNVGPVSERPQMSATNEDLKTNFHSLHNQMRQMPMSHFREALDAPD
CCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
YSGMRQSGFFAMSQGFQLESHGGDVFMHAHRENPQCKGDFAGDKFHISVQREQVPQAFQA
CCCCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
LSGLLFSVDSPIDKWKVTDMERVDQQSRVAVGAQFTLYVKPDQENSQYSASSLHNTRQFI
HHHHHHHCCCCCCHHCCCCHHHHCHHHHEEECCEEEEEECCCCCCCCHHHHHHHHHHHHH
ECLESRLSESGLMPGQYPESDVHPENWKYVSYRNELRSGRDGGEMQSQALREEPFYRLMA
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHCCHHHHHC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2315022; 11254626 [H]