| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gltJ [H]
Identifier: 34496729
GI number: 34496729
Start: 1340090
End: 1340830
Strand: Reverse
Name: gltJ [H]
Synonym: CV_1274
Alternate gene names: 34496729
Gene position: 1340830-1340090 (Counterclockwise)
Preceding gene: 34496730
Following gene: 34496728
Centisome position: 28.22
GC content: 69.64
Gene sequence:
>741_bases ATGACCCCACCCGCCTGGCTCGGCCACAACTGGCTGGAGCCGCACTATCTCATCTGGCTGGGCAAGGGCGCGCTGCTGAC CGGCTGGCTGTCGCTGCTGGTCATCGCCGCCGCCAGCCTGCTCGGCATCGCCCTGACCGCGCTGCTGGACGGCGGCCCGC GGCCGCTGCGGCTGGCGACGCGGCTATTCGTCGGCCTGCACCGCAACACGCCGCTGATGGTGCAGCTCTTGCTGTGGTAT TTCGGCGTGTCCGGCCTGCTGCCGGACGAGGCGAAAATCTGGCTGAACACCCCACGCGCGCTGATGCTGCCCTTCGATCT GGCCCTGCCCTGGCCGTCGTTCGAATTCCTGGCCGCCTTCACCGCGCTGACGCTGTACAGCGCCGCCTTCATCAGCGGCG AGCTGCAGGCCGGGCTGAACGCGGTGCCCAAAGGCCAGCGGCTGGCGGCGCGCGCGCTGGGCATGAGCGGCTGGCAGGTC TTGCGCCTGGTGGTGCTGCCGCAGGCCTGGCAGCTGGTTAAGCGGCCGCTGGTCGGCCAGTACACCGCCATCGTCAAGAA CACCTCGCTGACCATGGCCATCGGCCTGGCGGAGCTCTCTTACGCGTCGCGCCAGGTGGAGACCGAAACGCTGCTGGCCT TCCAGTCCTTCGCCGCCGCCACCGCGCTCTACCTGGCGCTGGTGCTGATCACCCAATTGCTGGCCCAGCGGCCGGAGCCG GCCTGGAGGACGATGCGATGA
Upstream 100 bases:
>100_bases TTCAAGATCGGCGACGCGGCCTGATCCCAGGCTGGTCCCCGTCCGCAACCGCCGGCTCCCCCGGCGGTTTTGCCGTTTCA TGTCGCAGAAAGAAAACCGC
Downstream 100 bases:
>100_bases TGCCTGCGGTGATACAGGACAACCTCGACTACCTGCTGTGGGGCAATCTGGCCGGCGGCGAGCCCGGCGGCCTGCTGCTG ACGCTGCTGCTGAGCCTGGC
Product: ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTPPAWLGHNWLEPHYLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLATRLFVGLHRNTPLMVQLLLWY FGVSGLLPDEAKIWLNTPRALMLPFDLALPWPSFEFLAAFTALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQV LRLVVLPQAWQLVKRPLVGQYTAIVKNTSLTMAIGLAELSYASRQVETETLLAFQSFAAATALYLALVLITQLLAQRPEP AWRTMR
Sequences:
>Translated_246_residues MTPPAWLGHNWLEPHYLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLATRLFVGLHRNTPLMVQLLLWY FGVSGLLPDEAKIWLNTPRALMLPFDLALPWPSFEFLAAFTALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQV LRLVVLPQAWQLVKRPLVGQYTAIVKNTSLTMAIGLAELSYASRQVETETLLAFQSFAAATALYLALVLITQLLAQRPEP AWRTMR >Mature_245_residues TPPAWLGHNWLEPHYLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLATRLFVGLHRNTPLMVQLLLWYF GVSGLLPDEAKIWLNTPRALMLPFDLALPWPSFEFLAAFTALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQVL RLVVLPQAWQLVKRPLVGQYTAIVKNTSLTMAIGLAELSYASRQVETETLLAFQSFAAATALYLALVLITQLLAQRPEPA WRTMR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=225, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788226, Length=233, Percent_Identity=33.4763948497854, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994930, Length=120, Percent_Identity=42.5, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=27.8026905829596, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787087, Length=189, Percent_Identity=29.1005291005291, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788645, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786873, Length=181, Percent_Identity=25.9668508287293, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=25.7731958762887, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27006; Mature: 26875
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPAWLGHNWLEPHYLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLAT CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RLFVGLHRNTPLMVQLLLWYFGVSGLLPDEAKIWLNTPRALMLPFDLALPWPSFEFLAAF HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHCCCCCCHHHHHHH TALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQVLRLVVLPQAWQLVKRPLVGQ HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH YTAIVKNTSLTMAIGLAELSYASRQVETETLLAFQSFAAATALYLALVLITQLLAQRPEP HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AWRTMR HHCCCC >Mature Secondary Structure TPPAWLGHNWLEPHYLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLAT CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RLFVGLHRNTPLMVQLLLWYFGVSGLLPDEAKIWLNTPRALMLPFDLALPWPSFEFLAAF HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHCCCCCCHHHHHHH TALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQVLRLVVLPQAWQLVKRPLVGQ HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH YTAIVKNTSLTMAIGLAELSYASRQVETETLLAFQSFAAATALYLALVLITQLLAQRPEP HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AWRTMR HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]