| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is folE
Identifier: 34496585
GI number: 34496585
Start: 1183073
End: 1183693
Strand: Reverse
Name: folE
Synonym: CV_1130
Alternate gene names: 34496585
Gene position: 1183693-1183073 (Counterclockwise)
Preceding gene: 34496586
Following gene: 34496575
Centisome position: 24.91
GC content: 70.53
Gene sequence:
>621_bases ATGTCCTTTACCGACGATCACGACCACGCCGCCTGCCAGCGCCCGCTGGAACGGGTCCGCCCGTTCGACGCCGCCGCCTT CGAGCGGGCGGTGGCCGACATGCTGACCGCCAGCGGCATCGCCATCGATCCCATCCACACCGGCAAGACCGCCCAGCGCG TGCGCGAGCTGTGGCAGAAGCGCCTGCTGGACGGCTACGACACCGTGCCAGCCGAAGCGCTGGGCAGCGGCTTCGCCGAC GAGCGCCGCGACATGGTGGTGATACGCAGCCTGGCGGTGCACGGCATGTGCCCGCACCACTTGCTGCCCTTCCGCGGCGT CGCCCACGTCGCCTACCTGCCCGGCGGCCGGCTGCACGGCTTCGGCCGCATCGCGCGCATGGTGGACGCCATCAGCCACC GCTACACCTACCAGGAATGGATCACCCACGAGATCGCCCGCACCCTGGTCGAGCACGGCGAGGCGCGCGGCGCCGCCTGC CTGATCGAGGCCGAGCAGCTATGCCTGCTGATGGGGGAAAACCGGCGCGGCGACGAACGGGTGATCACCCAGTGCTACGC CGGCGACTTCGAAACCGACGCGGAAGCCCGCAACCAGTTCCTGCGCGCGATCGAGCGCTGA
Upstream 100 bases:
>100_bases AAATAAATGGGCGAAATCTGATCGTCAGACCGGCCCCTGTCCCTATACCATGAGGGACACGAGGCCGGACGCCCTTGCTC CGGCCGCAACGGAGCCGCCC
Downstream 100 bases:
>100_bases GCGGCGGACAGCGAAAAGGCCGCTGCCCGTAAAAGGCAGCGGCCTTGATGTCTTTTGCGCGGGCGTCCGCCGCGCTAATC CAGCAAGCCGCCGGATTCGG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSFTDDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTAQRVRELWQKRLLDGYDTVPAEALGSGFAD ERRDMVVIRSLAVHGMCPHHLLPFRGVAHVAYLPGGRLHGFGRIARMVDAISHRYTYQEWITHEIARTLVEHGEARGAAC LIEAEQLCLLMGENRRGDERVITQCYAGDFETDAEARNQFLRAIER
Sequences:
>Translated_206_residues MSFTDDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTAQRVRELWQKRLLDGYDTVPAEALGSGFAD ERRDMVVIRSLAVHGMCPHHLLPFRGVAHVAYLPGGRLHGFGRIARMVDAISHRYTYQEWITHEIARTLVEHGEARGAAC LIEAEQLCLLMGENRRGDERVITQCYAGDFETDAEARNQFLRAIER >Mature_205_residues SFTDDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTAQRVRELWQKRLLDGYDTVPAEALGSGFADE RRDMVVIRSLAVHGMCPHHLLPFRGVAHVAYLPGGRLHGFGRIARMVDAISHRYTYQEWITHEIARTLVEHGEARGAACL IEAEQLCLLMGENRRGDERVITQCYAGDFETDAEARNQFLRAIER
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=141, Percent_Identity=31.9148936170213, Blast_Score=95, Evalue=4e-20, Organism=Homo sapiens, GI4503949, Length=141, Percent_Identity=31.9148936170213, Blast_Score=95, Evalue=4e-20, Organism=Homo sapiens, GI66932970, Length=123, Percent_Identity=30.0813008130081, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI66932972, Length=101, Percent_Identity=34.6534653465347, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560486, Length=143, Percent_Identity=33.5664335664336, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321706, Length=129, Percent_Identity=28.6821705426357, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI24656796, Length=142, Percent_Identity=30.9859154929577, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24656791, Length=142, Percent_Identity=30.9859154929577, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24656782, Length=142, Percent_Identity=30.9859154929577, Blast_Score=85, Evalue=4e-17,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_CHRVO (Q7NYZ2)
Other databases:
- EMBL: AE016825 - RefSeq: NP_900800.1 - ProteinModelPortal: Q7NYZ2 - SMR: Q7NYZ2 - GeneID: 2550409 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1130 - NMPDR: fig|243365.1.peg.1130 - HOGENOM: HBG370191 - OMA: RELWQKR - ProtClustDB: PRK09347 - BioCyc: CVIO243365:CV_1130-MONOMER - BRENDA: 3.5.4.16 - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 23163; Mature: 23031
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTDDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTAQRVRELWQK CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHH RLLDGYDTVPAEALGSGFADERRDMVVIRSLAVHGMCPHHLLPFRGVAHVAYLPGGRLHG HHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCHHH FGRIARMVDAISHRYTYQEWITHEIARTLVEHGEARGAACLIEAEQLCLLMGENRRGDER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHH VITQCYAGDFETDAEARNQFLRAIER HHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SFTDDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTAQRVRELWQK CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHH RLLDGYDTVPAEALGSGFADERRDMVVIRSLAVHGMCPHHLLPFRGVAHVAYLPGGRLHG HHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCHHH FGRIARMVDAISHRYTYQEWITHEIARTLVEHGEARGAACLIEAEQLCLLMGENRRGDER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHH VITQCYAGDFETDAEARNQFLRAIER HHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782