Click here to switch to the map view.

The map label for this gene is motC [H]

Identifier: 34496476

GI number: 34496476

Start: 1065323

End: 1066072

Strand: Reverse

Name: motC [H]

Synonym: CV_1021

Alternate gene names: 34496476

Gene position: 1066072-1065323 (Counterclockwise)

Preceding gene: 34496477

Following gene: 34496474

Centisome position: 22.44

GC content: 65.47

Gene sequence:

>750_bases
GTGGACAAGATCAGTCTTATCGCCATTGTAATGGGCCTGACCGCCATCATCGCAGGCCAGGCCATCGAGGGGGGCAGCAT
TGGCTCGCTGATGCAGCTGACCGCCTTCATGATCGTGATCGGCGGCACCACCAGCGCGGTGATGCTGCAAAGCACGCCCA
AGCAGTTCATGGCCGGCCTGCGCATGCTGCGCTGGATCTTCCGCCCGCCCAACTTCGACCACGAGAAAATGATCCGCGAG
GTCATCAACTGGAGCCAGACCTCGCGCAAGGGCGGCCTCTTGGCGCTGGAAGGCCTGATCGCCACCCAGCGCGACCCGTT
CACCAAGAAGGCGATGCAGATGCTGGTGGACGGCACCGAGCCGGACACGCTGCGCGCGGTGATGGAGGTGGAGATCAGCA
TGTTCGAGCACGCCCGCAGGCAGGCGGCGCGCATCTGGGAGTCGGCCGGCGGCTACGCGCCGACCATGGGCATCCTGGGC
GCGGTGCTGGGCCTGATCCACGTGATGGAGAACCTGTCCGACCCGTCCAAGCTGGGCGGCGGCATCGCGGTGGCCTTCGT
CGCTACCGTCTACGGCGTCGGCTCGGCCAACCTGTTCTTCCTGCCCATGGCCAACAAGCTCAAGCACCTGGTGGCGTCGG
AACTGGCGATGAAGGAGCTGGTGGTGGAAGGCGTGGTGGCGATCGCCAACGGCGAGAACCCGCGCATCATCGAGAGCCGG
CTGCGCGGCTTCCTGGCGATGCACGAATAA

Upstream 100 bases:

>100_bases
GTAGGAGCCTGTGATCTTTTTACGAGCAAGAGATCGTAAACAGGCTCTAAGGGAGGGCCCGGCAACGGGTCTCAGACCAG
ATCGATAACGGAACCTTCTT

Downstream 100 bases:

>100_bases
TCTCAAACCGCCCGGGACGGAAGCATGAGACAGCGTGTTTTCGGCAGCATAGACTCCTTTGTCGAGTCCGCGGACAGCAG
TCTGAAAATCGGCCGGCTGG

Product: flagellar motor protein

Products: NA

Alternate protein names: Chemotaxis protein MotA [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDKISLIAIVMGLTAIIAGQAIEGGSIGSLMQLTAFMIVIGGTTSAVMLQSTPKQFMAGLRMLRWIFRPPNFDHEKMIRE
VINWSQTSRKGGLLALEGLIATQRDPFTKKAMQMLVDGTEPDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILG
AVLGLIHVMENLSDPSKLGGGIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVVEGVVAIANGENPRIIESR
LRGFLAMHE

Sequences:

>Translated_249_residues
MDKISLIAIVMGLTAIIAGQAIEGGSIGSLMQLTAFMIVIGGTTSAVMLQSTPKQFMAGLRMLRWIFRPPNFDHEKMIRE
VINWSQTSRKGGLLALEGLIATQRDPFTKKAMQMLVDGTEPDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILG
AVLGLIHVMENLSDPSKLGGGIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVVEGVVAIANGENPRIIESR
LRGFLAMHE
>Mature_249_residues
MDKISLIAIVMGLTAIIAGQAIEGGSIGSLMQLTAFMIVIGGTTSAVMLQSTPKQFMAGLRMLRWIFRPPNFDHEKMIRE
VINWSQTSRKGGLLALEGLIATQRDPFTKKAMQMLVDGTEPDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILG
AVLGLIHVMENLSDPSKLGGGIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVVEGVVAIANGENPRIIESR
LRGFLAMHE

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26938; Mature: 26938

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKISLIAIVMGLTAIIAGQAIEGGSIGSLMQLTAFMIVIGGTTSAVMLQSTPKQFMAGL
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
RMLRWIFRPPNFDHEKMIREVINWSQTSRKGGLLALEGLIATQRDPFTKKAMQMLVDGTE
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHCCCC
PDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILGAVLGLIHVMENLSDPSKLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
GIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVVEGVVAIANGENPRIIESR
HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
LRGFLAMHE
HHHHHHCCC
>Mature Secondary Structure
MDKISLIAIVMGLTAIIAGQAIEGGSIGSLMQLTAFMIVIGGTTSAVMLQSTPKQFMAGL
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH
RMLRWIFRPPNFDHEKMIREVINWSQTSRKGGLLALEGLIATQRDPFTKKAMQMLVDGTE
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHCCCC
PDTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILGAVLGLIHVMENLSDPSKLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
GIAVAFVATVYGVGSANLFFLPMANKLKHLVASELAMKELVVEGVVAIANGENPRIIESR
HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
LRGFLAMHE
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]