| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cheW3 [H]
Identifier: 34496467
GI number: 34496467
Start: 1051020
End: 1051565
Strand: Reverse
Name: cheW3 [H]
Synonym: CV_1012
Alternate gene names: 34496467
Gene position: 1051565-1051020 (Counterclockwise)
Preceding gene: 34496468
Following gene: 34496466
Centisome position: 22.13
GC content: 63.19
Gene sequence:
>546_bases ATGGCCGCACTCAATATTCTCCGCCGCAGCGAGGCCGCTCCGGAACCAGGCGCCCAGGCCGAGGTACGGCAGTTCCTGAC TTTCCAGCTGGCCGGCGAAACCTTCGCCATCGGCATCCTGCGGATACGGGAAATCCTGGAATACATCAAACCCACCTCCG TGCCGCTGATGCCGCCCTTCATCCGCGGCGTGATGAACCTGCGCGGCGCGGTGGTGCCGGTGATAGACCTGTCGCTGCGC TTCGGCCGCGACGAAACCGCGATCAACCGGCGCACCTGCATCGTCATCATCGAAGTGGAGCACGACGAGCAGTGGCAGCT GATCGGCGTGCTGGTGGACACCGTGCACGAGGTGCTGGCCATTCCGGACAGCGAGATCGAACCCCCGCCTCAGTTCGGCA GCAAGATACGCGTGGACTTCATTTCCGGCATGGCCAGGATAGACAACCGCTTCGTCGTGATGCTGGACGTGGACAAGGTG CTGTCGGTCGGCGAAATGTCGCTGCTGTCCGGACTGAGCCGCCAGGAAGAGGCGCAGGAAGAATGA
Upstream 100 bases:
>100_bases GCCCGCGCCCGCCGCCGTCCACAGGCCGCAAGCGGCCCTGCCCGCGGCGGCCGACCATCACGGCTTCATGCAGTTCTGAC CCGGCAGGAGCGACACAGAC
Downstream 100 bases:
>100_bases CGCCGCCCAACCGTCCGAAACGGAAACCGAGATGAAAACATTCACCGTCCGCCGGCAATTCGTCCTGCTGGCCGCCTGCG CGCTGCTGGGACTGGGAGGA
Product: signal transduction chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAALNILRRSEAAPEPGAQAEVRQFLTFQLAGETFAIGILRIREILEYIKPTSVPLMPPFIRGVMNLRGAVVPVIDLSLR FGRDETAINRRTCIVIIEVEHDEQWQLIGVLVDTVHEVLAIPDSEIEPPPQFGSKIRVDFISGMARIDNRFVVMLDVDKV LSVGEMSLLSGLSRQEEAQEE
Sequences:
>Translated_181_residues MAALNILRRSEAAPEPGAQAEVRQFLTFQLAGETFAIGILRIREILEYIKPTSVPLMPPFIRGVMNLRGAVVPVIDLSLR FGRDETAINRRTCIVIIEVEHDEQWQLIGVLVDTVHEVLAIPDSEIEPPPQFGSKIRVDFISGMARIDNRFVVMLDVDKV LSVGEMSLLSGLSRQEEAQEE >Mature_180_residues AALNILRRSEAAPEPGAQAEVRQFLTFQLAGETFAIGILRIREILEYIKPTSVPLMPPFIRGVMNLRGAVVPVIDLSLRF GRDETAINRRTCIVIIEVEHDEQWQLIGVLVDTVHEVLAIPDSEIEPPPQFGSKIRVDFISGMARIDNRFVVMLDVDKVL SVGEMSLLSGLSRQEEAQEE
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=160, Percent_Identity=31.25, Blast_Score=109, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 20234; Mature: 20103
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALNILRRSEAAPEPGAQAEVRQFLTFQLAGETFAIGILRIREILEYIKPTSVPLMPPF CCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH IRGVMNLRGAVVPVIDLSLRFGRDETAINRRTCIVIIEVEHDEQWQLIGVLVDTVHEVLA HHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHC IPDSEIEPPPQFGSKIRVDFISGMARIDNRFVVMLDVDKVLSVGEMSLLSGLSRQEEAQE CCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHCC E C >Mature Secondary Structure AALNILRRSEAAPEPGAQAEVRQFLTFQLAGETFAIGILRIREILEYIKPTSVPLMPPF CHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH IRGVMNLRGAVVPVIDLSLRFGRDETAINRRTCIVIIEVEHDEQWQLIGVLVDTVHEVLA HHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHC IPDSEIEPPPQFGSKIRVDFISGMARIDNRFVVMLDVDKVLSVGEMSLLSGLSRQEEAQE CCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]