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The map label for this gene is ykfE [C]

Identifier: 34496312

GI number: 34496312

Start: 885965

End: 886438

Strand: Reverse

Name: ykfE [C]

Synonym: CV_0857

Alternate gene names: 34496312

Gene position: 886438-885965 (Counterclockwise)

Preceding gene: 34496313

Following gene: 34496311

Centisome position: 18.66

GC content: 68.57

Gene sequence:

>474_bases
ATGAAAACGCTCGCCCCCCTGCTATTGTCCCTGTCCATCCTGCTGCCGGCCGCGCCGGCCGTCGCCGCGCCCGCCTCCTC
GGCGCCGGCCGCCGAAGCGGTGTTCGCCGAGCTGGCGCGCCAGCCGGATTACCAGGCGGCCTGGATGAGCATGACGGCAG
GCGCCAAAGACGCGCCGGAGTGGCTGCGCGAAGCCCGCGCCACCAGCGCGCCCTACCACTCCGCCTTCATTGCCGGCAAA
CGCTACCTGGCCGGCGAGATGTGCAAGCCGCACGACTGCGCGTCCAACCGCTTCTTCGGCCTGTTCAGCGCCGACAAGCG
CCGCGCCGTCGGCCTGCTGGTAACGGTGGCCGACGTGCCCGAGGCGGTGGATCACCCGGCCAAGCACGCCAGCTACCGCT
GGTTCGGCAAGCCGGACAAAAACCAGCGCGCCTATCTGATGCAACAACTGAAACAGGATCCGAACTGGAAATGA

Upstream 100 bases:

>100_bases
CGACACCGCGTTCAAGAACGGCAAGCTGTTGACCGCCTGACGGAATTTTCGCTTGCGGCGGCGATCCAAGCTGTTTTGCA
TCGCCGCCGGAATCCGCCTC

Downstream 100 bases:

>100_bases
AAACGCTGAAACCCCTACTCGCCACGCTGCCCGCATTCCTTCTGGCCGCCTGCGCGCAAAATCCCGCGCCGCAGCCGAAG
GCGGTGGGCATGGCCAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKTLAPLLLSLSILLPAAPAVAAPASSAPAAEAVFAELARQPDYQAAWMSMTAGAKDAPEWLREARATSAPYHSAFIAGK
RYLAGEMCKPHDCASNRFFGLFSADKRRAVGLLVTVADVPEAVDHPAKHASYRWFGKPDKNQRAYLMQQLKQDPNWK

Sequences:

>Translated_157_residues
MKTLAPLLLSLSILLPAAPAVAAPASSAPAAEAVFAELARQPDYQAAWMSMTAGAKDAPEWLREARATSAPYHSAFIAGK
RYLAGEMCKPHDCASNRFFGLFSADKRRAVGLLVTVADVPEAVDHPAKHASYRWFGKPDKNQRAYLMQQLKQDPNWK
>Mature_157_residues
MKTLAPLLLSLSILLPAAPAVAAPASSAPAAEAVFAELARQPDYQAAWMSMTAGAKDAPEWLREARATSAPYHSAFIAGK
RYLAGEMCKPHDCASNRFFGLFSADKRRAVGLLVTVADVPEAVDHPAKHASYRWFGKPDKNQRAYLMQQLKQDPNWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ivy family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014453 [H]

Pfam domain/function: PF08816 Ivy [H]

EC number: NA

Molecular weight: Translated: 17139; Mature: 17139

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLAPLLLSLSILLPAAPAVAAPASSAPAAEAVFAELARQPDYQAAWMSMTAGAKDAPE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
WLREARATSAPYHSAFIAGKRYLAGEMCKPHDCASNRFFGLFSADKRRAVGLLVTVADVP
HHHHHHCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHEEEHHHCC
EAVDHPAKHASYRWFGKPDKNQRAYLMQQLKQDPNWK
HHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTLAPLLLSLSILLPAAPAVAAPASSAPAAEAVFAELARQPDYQAAWMSMTAGAKDAPE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
WLREARATSAPYHSAFIAGKRYLAGEMCKPHDCASNRFFGLFSADKRRAVGLLVTVADVP
HHHHHHCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHEEEHHHCC
EAVDHPAKHASYRWFGKPDKNQRAYLMQQLKQDPNWK
HHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]