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The map label for this gene is yoaF [H]

Identifier: 34496311

GI number: 34496311

Start: 885711

End: 885968

Strand: Reverse

Name: yoaF [H]

Synonym: CV_0856

Alternate gene names: 34496311

Gene position: 885968-885711 (Counterclockwise)

Preceding gene: 34496312

Following gene: 34496302

Centisome position: 18.65

GC content: 68.6

Gene sequence:

>258_bases
ATGAAAACGCTGAAACCCCTACTCGCCACGCTGCCCGCATTCCTTCTGGCCGCCTGCGCGCAAAATCCCGCGCCGCAGCC
GAAGGCGGTGGGCATGGCCAATCCGGCCTCGGTCCATTGCGTGAAGCAAGGCGGCAAGCTGTTGCCGCAGAAGGACGCCG
CCGGCAACGAATACGCGCTGTGCCAGCTGCCCGATGGCCGGACGGTGGAGGAGTGGACGCTGTTCCGCTCGCAGCAGCCG
GCCGCCGGCGCGCCCTGA

Upstream 100 bases:

>100_bases
ATCACCCGGCCAAGCACGCCAGCTACCGCTGGTTCGGCAAGCCGGACAAAAACCAGCGCGCCTATCTGATGCAACAACTG
AAACAGGATCCGAACTGGAA

Downstream 100 bases:

>100_bases
CCACCTTATCCACAGCGATCCGCCAAACCTGAAGTTATCCACAACCTTCGCGCGCGCCAAAAAACAAACCCGCCGGCTGA
CCGCTCCGGCGGGTTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKTLKPLLATLPAFLLAACAQNPAPQPKAVGMANPASVHCVKQGGKLLPQKDAAGNEYALCQLPDGRTVEEWTLFRSQQP
AAGAP

Sequences:

>Translated_85_residues
MKTLKPLLATLPAFLLAACAQNPAPQPKAVGMANPASVHCVKQGGKLLPQKDAAGNEYALCQLPDGRTVEEWTLFRSQQP
AAGAP
>Mature_85_residues
MKTLKPLLATLPAFLLAACAQNPAPQPKAVGMANPASVHCVKQGGKLLPQKDAAGNEYALCQLPDGRTVEEWTLFRSQQP
AAGAP

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=83, Percent_Identity=44.578313253012, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 8908; Mature: 8908

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKPLLATLPAFLLAACAQNPAPQPKAVGMANPASVHCVKQGGKLLPQKDAAGNEYAL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCEEE
CQLPDGRTVEEWTLFRSQQPAAGAP
EECCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKTLKPLLATLPAFLLAACAQNPAPQPKAVGMANPASVHCVKQGGKLLPQKDAAGNEYAL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCEEE
CQLPDGRTVEEWTLFRSQQPAAGAP
EECCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]