| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496299
Identifier: 34496299
GI number: 34496299
Start: 877002
End: 877916
Strand: Reverse
Name: 34496299
Synonym: CV_0844
Alternate gene names: NA
Gene position: 877916-877002 (Counterclockwise)
Preceding gene: 34496300
Following gene: 34496298
Centisome position: 18.48
GC content: 39.56
Gene sequence:
>915_bases ATGGATGATGCAAACAAAATAAAATTCGCTCTCTATCTAGAAGGATGGAGTTATAACTCAGATGAAAAAAGTATTCTACG ATTAAAAGCCATTGAAGTTACTCCGACTGAATACACATTAAATATGAAAGGCCATATATTCTGCCCTGAATGTTGCGTTG GGCTTTTCCGCTCACCAGAGGACAAAGAATATGATAGTAAAGGACGCAAGGCATTCTATGCGCACAGTAGAGCTTATACC CCAGAGTGTAGCCTTCGCGTTAAGAAAGCTGAAGGGAAGAGATTCGAGAATGAAGAATTAGCAAAGAAAGCCATTGAGAA TGGCGAGCTAGCTATTGTAAAAGAATTTTTGAAGAAAAGACCGATTAGACCAGAAATTGATGAGCCTTTAGAATATCAAG GCAATCCAGTAGAAGATCAAAGCGGCAAACTTTCACTTGCACCCATTGGAAGGCATAGTGGAGATGAATTCAAGTTGCCA GGGGAATTTACATCAATTCGAGGACTTTGCCGAAACTTCAATAAAAATCTATATCGATACATTTATCTACCAGGAAGTAG ATCTGCTTATACCCTGAAGGATCTATTGACAAATATCGAAAACGTCACAGAAACCTGCGACGAGCCGAAATTGTATTTTG GCAGAGTTACCAAATCTTGGAACTGCGGAAAGACACCAGAAAACATTCGGCAAACAATGCTTCGGTATCGCAGAAACCCT AAATATAAAGACTTCTGCCTAAAGGCTACCGACAAAGATAGCCAAGACCACGGAATTGGAGACGAATCAAGCGGGAAAGT GGTTATTATTTTCGGAAAAGTATTGGAAAGTGGTATTGGCTTGTGCATTAATAATTTGGGGTGGGGTGAATTTGCTATCT TGCCTGATAAATATGTACATCTACTCTACGAATAA
Upstream 100 bases:
>100_bases TGGTCCTTCAAGAAACAGCCCCTGTGCCGTAATTCGTCAAAGCTAGTGAATTTGTTGAATAATTGTTATGCCTGTACTGC CACCTTAGTCGAGATTAATA
Downstream 100 bases:
>100_bases TCGACATAGTCCTTTGAAATCAAGCGATATTCCACAGCAAGCACAAGCCCATACTATTGAATTTTAACGAGGAAAGACAA GTGCGCACCCAGGATATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MDDANKIKFALYLEGWSYNSDEKSILRLKAIEVTPTEYTLNMKGHIFCPECCVGLFRSPEDKEYDSKGRKAFYAHSRAYT PECSLRVKKAEGKRFENEELAKKAIENGELAIVKEFLKKRPIRPEIDEPLEYQGNPVEDQSGKLSLAPIGRHSGDEFKLP GEFTSIRGLCRNFNKNLYRYIYLPGSRSAYTLKDLLTNIENVTETCDEPKLYFGRVTKSWNCGKTPENIRQTMLRYRRNP KYKDFCLKATDKDSQDHGIGDESSGKVVIIFGKVLESGIGLCINNLGWGEFAILPDKYVHLLYE
Sequences:
>Translated_304_residues MDDANKIKFALYLEGWSYNSDEKSILRLKAIEVTPTEYTLNMKGHIFCPECCVGLFRSPEDKEYDSKGRKAFYAHSRAYT PECSLRVKKAEGKRFENEELAKKAIENGELAIVKEFLKKRPIRPEIDEPLEYQGNPVEDQSGKLSLAPIGRHSGDEFKLP GEFTSIRGLCRNFNKNLYRYIYLPGSRSAYTLKDLLTNIENVTETCDEPKLYFGRVTKSWNCGKTPENIRQTMLRYRRNP KYKDFCLKATDKDSQDHGIGDESSGKVVIIFGKVLESGIGLCINNLGWGEFAILPDKYVHLLYE >Mature_304_residues MDDANKIKFALYLEGWSYNSDEKSILRLKAIEVTPTEYTLNMKGHIFCPECCVGLFRSPEDKEYDSKGRKAFYAHSRAYT PECSLRVKKAEGKRFENEELAKKAIENGELAIVKEFLKKRPIRPEIDEPLEYQGNPVEDQSGKLSLAPIGRHSGDEFKLP GEFTSIRGLCRNFNKNLYRYIYLPGSRSAYTLKDLLTNIENVTETCDEPKLYFGRVTKSWNCGKTPENIRQTMLRYRRNP KYKDFCLKATDKDSQDHGIGDESSGKVVIIFGKVLESGIGLCINNLGWGEFAILPDKYVHLLYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34857; Mature: 34857
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDANKIKFALYLEGWSYNSDEKSILRLKAIEVTPTEYTLNMKGHIFCPECCVGLFRSPE CCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEECCCCEECHHHHHHHHCCCC DKEYDSKGRKAFYAHSRAYTPECSLRVKKAEGKRFENEELAKKAIENGELAIVKEFLKKR CCCHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHC PIRPEIDEPLEYQGNPVEDQSGKLSLAPIGRHSGDEFKLPGEFTSIRGLCRNFNKNLYRY CCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCEECCCCHHHHHHHHHHCCCCEEEE IYLPGSRSAYTLKDLLTNIENVTETCDEPKLYFGRVTKSWNCGKTPENIRQTMLRYRRNP EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC KYKDFCLKATDKDSQDHGIGDESSGKVVIIFGKVLESGIGLCINNLGWGEFAILPDKYVH CHHHEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCHHEEECCCCCCEEEECCHHHEE LLYE EECC >Mature Secondary Structure MDDANKIKFALYLEGWSYNSDEKSILRLKAIEVTPTEYTLNMKGHIFCPECCVGLFRSPE CCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEECCCCEECHHHHHHHHCCCC DKEYDSKGRKAFYAHSRAYTPECSLRVKKAEGKRFENEELAKKAIENGELAIVKEFLKKR CCCHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHC PIRPEIDEPLEYQGNPVEDQSGKLSLAPIGRHSGDEFKLPGEFTSIRGLCRNFNKNLYRY CCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCEECCCCHHHHHHHHHHCCCCEEEE IYLPGSRSAYTLKDLLTNIENVTETCDEPKLYFGRVTKSWNCGKTPENIRQTMLRYRRNP EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC KYKDFCLKATDKDSQDHGIGDESSGKVVIIFGKVLESGIGLCINNLGWGEFAILPDKYVH CHHHEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCHHEEECCCCCCEEEECCHHHEE LLYE EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA