Click here to switch to the map view.

The map label for this gene is rfaB [H]

Identifier: 34496276

GI number: 34496276

Start: 847622

End: 848713

Strand: Reverse

Name: rfaB [H]

Synonym: CV_0821

Alternate gene names: 34496276

Gene position: 848713-847622 (Counterclockwise)

Preceding gene: 34496277

Following gene: 34496267

Centisome position: 17.86

GC content: 68.32

Gene sequence:

>1092_bases
ATGCGCCACACCATTCTGTTCATCATCGACGGCCTGCCCGGGGGCGGCGCCGAGCGCGTGGTCATCACGCTGGCCGGCGA
GATGGCCGCCCGCGGCCATCAGGTCACGATCGCCTCGCTGCAGGCCAGCCTCGACTACGCGATACCCGCCGGCGTCGACT
ACCTGCTGGTGGAAGACCGCTACCGCGGGCCGCTCCGCCGCCAGACCGAAATCCGCCGCCGGGCCCGCCAGCTCGACGGC
GCGCTGCGCCGGCACTTCGCAGGACGCCGCATCGACCTGGCCGTTTCCAACCTGCCCAAAACCGACAGGATCGTGGCGGC
CTGCCCCTACCTGGAACAAGCCTGGCTGTGCCTGCATTGCGCGATCCAGGCCGGGCAACTGGCGGAGCGAAGCGGCATCC
GGCGCTGGCTGAAAAAACGCCAGCTCGTCCGCACCTACTCAGGCCGCAAACTGATCACGGTCTGCCAGGCGCTGCAGCGG
GACGTGCTGGACTGCGGCATACGACCGGCGCGGATGGAGGCCATCTACAATCCGTTCGACCTGGACTGGATACGCCGGCG
CGCGGCCCAGCCCTGCCCGATGGACGGGGAGGATTTCATCCTCCATGTCGGGCGCTTCAACCACCAGAAACGACACGACC
GGCTGCTGGAAGCATTCAAGCTGAGCGGCTATCCCGGCAAGCTGGCGCTGCTCGGCCAGGGCGGCCAGGCCGAACTGTCC
GCAATCCAGGTCCAGGCAGAGCGGCTGGGCGTCGCGGATCGGCTGGTCGTCGCGGGCTTCACGGACAATCCATACGCCTA
CATGCGCGCCGCGCGCGCGCTGGTGCTCAGCTCCGACTACGAAGGGTTCGGCAACGTGCTGGTCGAGGCGCTGGCCTGCG
GCACCCCGGTGGCCAGCACCAATTGCCCCGAAGGCCCGGCGGAAATCCTGACCGGCCCGCTGTCGATCGGTCTGAGCGAG
CTGAATGGCCAAGCGCTGGCCGATGCGATCAAACGCGTGCTGGCCTCGCGCCCGCTTGCCGGGCCGGAGCAACTGGCCGC
ATTCGCTCAGGACGCCGTCGTCGAACGTTATCTGGCGCTGGTCAATCAGTAA

Upstream 100 bases:

>100_bases
GGACACCTCGACCCGCCAGCGCTACCTGAAAAACATCCCGCTGGAGGCGGCGCTGCGCGCCAGCCGCGAACTGCTGTCCT
CCCCAGCTCAGGAATAAAGC

Downstream 100 bases:

>100_bases
GCTAAAGCCTCCTCTCATCCCTGGCGTCGAATATCGGCGCCAGGTATAAGCCAAGAGCTGCAAACATCGCGCCAAACATT
GCAATCTGCGGACTCAGCAA

Product: lipopolysaccharide glucosyltransferase I

Products: NA

Alternate protein names: UDP-D-galactose--(Glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRHTILFIIDGLPGGGAERVVITLAGEMAARGHQVTIASLQASLDYAIPAGVDYLLVEDRYRGPLRRQTEIRRRARQLDG
ALRRHFAGRRIDLAVSNLPKTDRIVAACPYLEQAWLCLHCAIQAGQLAERSGIRRWLKKRQLVRTYSGRKLITVCQALQR
DVLDCGIRPARMEAIYNPFDLDWIRRRAAQPCPMDGEDFILHVGRFNHQKRHDRLLEAFKLSGYPGKLALLGQGGQAELS
AIQVQAERLGVADRLVVAGFTDNPYAYMRAARALVLSSDYEGFGNVLVEALACGTPVASTNCPEGPAEILTGPLSIGLSE
LNGQALADAIKRVLASRPLAGPEQLAAFAQDAVVERYLALVNQ

Sequences:

>Translated_363_residues
MRHTILFIIDGLPGGGAERVVITLAGEMAARGHQVTIASLQASLDYAIPAGVDYLLVEDRYRGPLRRQTEIRRRARQLDG
ALRRHFAGRRIDLAVSNLPKTDRIVAACPYLEQAWLCLHCAIQAGQLAERSGIRRWLKKRQLVRTYSGRKLITVCQALQR
DVLDCGIRPARMEAIYNPFDLDWIRRRAAQPCPMDGEDFILHVGRFNHQKRHDRLLEAFKLSGYPGKLALLGQGGQAELS
AIQVQAERLGVADRLVVAGFTDNPYAYMRAARALVLSSDYEGFGNVLVEALACGTPVASTNCPEGPAEILTGPLSIGLSE
LNGQALADAIKRVLASRPLAGPEQLAAFAQDAVVERYLALVNQ
>Mature_363_residues
MRHTILFIIDGLPGGGAERVVITLAGEMAARGHQVTIASLQASLDYAIPAGVDYLLVEDRYRGPLRRQTEIRRRARQLDG
ALRRHFAGRRIDLAVSNLPKTDRIVAACPYLEQAWLCLHCAIQAGQLAERSGIRRWLKKRQLVRTYSGRKLITVCQALQR
DVLDCGIRPARMEAIYNPFDLDWIRRRAAQPCPMDGEDFILHVGRFNHQKRHDRLLEAFKLSGYPGKLALLGQGGQAELS
AIQVQAERLGVADRLVVAGFTDNPYAYMRAARALVLSSDYEGFGNVLVEALACGTPVASTNCPEGPAEILTGPLSIGLSE
LNGQALADAIKRVLASRPLAGPEQLAAFAQDAVVERYLALVNQ

Specific function: Adds a galactose goup to a glucose group of LPS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=166, Percent_Identity=28.9156626506024, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 39909; Mature: 39909

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHTILFIIDGLPGGGAERVVITLAGEMAARGHQVTIASLQASLDYAIPAGVDYLLVEDR
CCEEEEEEEECCCCCCCCEEEEEEECHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEEECC
YRGPLRRQTEIRRRARQLDGALRRHFAGRRIDLAVSNLPKTDRIVAACPYLEQAWLCLHC
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHH
AIQAGQLAERSGIRRWLKKRQLVRTYSGRKLITVCQALQRDVLDCGIRPARMEAIYNPFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
LDWIRRRAAQPCPMDGEDFILHVGRFNHQKRHDRLLEAFKLSGYPGKLALLGQGGQAELS
HHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHH
AIQVQAERLGVADRLVVAGFTDNPYAYMRAARALVLSSDYEGFGNVLVEALACGTPVAST
HHHHHHHHHCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
NCPEGPAEILTGPLSIGLSELNGQALADAIKRVLASRPLAGPEQLAAFAQDAVVERYLAL
CCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VNQ
HCC
>Mature Secondary Structure
MRHTILFIIDGLPGGGAERVVITLAGEMAARGHQVTIASLQASLDYAIPAGVDYLLVEDR
CCEEEEEEEECCCCCCCCEEEEEEECHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEEECC
YRGPLRRQTEIRRRARQLDGALRRHFAGRRIDLAVSNLPKTDRIVAACPYLEQAWLCLHC
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHH
AIQAGQLAERSGIRRWLKKRQLVRTYSGRKLITVCQALQRDVLDCGIRPARMEAIYNPFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
LDWIRRRAAQPCPMDGEDFILHVGRFNHQKRHDRLLEAFKLSGYPGKLALLGQGGQAELS
HHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHH
AIQVQAERLGVADRLVVAGFTDNPYAYMRAARALVLSSDYEGFGNVLVEALACGTPVAST
HHHHHHHHHCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
NCPEGPAEILTGPLSIGLSELNGQALADAIKRVLASRPLAGPEQLAAFAQDAVVERYLAL
CCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VNQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624461; 8041620; 9278503 [H]