| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496266
Identifier: 34496266
GI number: 34496266
Start: 836091
End: 836894
Strand: Reverse
Name: 34496266
Synonym: CV_0811
Alternate gene names: NA
Gene position: 836894-836091 (Counterclockwise)
Preceding gene: 34496267
Following gene: 34496264
Centisome position: 17.61
GC content: 71.27
Gene sequence:
>804_bases GTGAACCGCTGGCACACCGACTACCTGTCCCATCCGCTGTACCGCCCGACGCGGCGCTTCCTGCCCGCGCTCGCCGGCTG GCCCGACCAAGCCGGCTACGACGCGCTGCTGGCGCGCGCCCGCGCCGCCGGCTCGCCGTTGCCGGCTGGCCTGCGCTTCG TCTGCGGACTGGAGCCCGACGGCTATTACGAGACGCACATCGGCGCGACCGGCGAGGTCCCCACCCGCGCGGAAAACTGG CATGACTGGTTCAACGCGCTGGCCTGGCTGGCCTGGCCGCGAAGCAAGGCGGCGCTGAACCGGCGCCACGTGCGCGCGAT CGGCCGCGGCGAAGTGAAACGCGGCCCGCTGCGCGACGCCGCCACCTTGCTGGACGAGTGCGGCGTCGTCGTGGCGACCG CCGACCCGCAGCTGGGCCAGTTGCTGGACGATATGCGCTGGCAAGCGCTGTTCATCGAACGCCGGCAGGACTGGGGCCGC CGCATCGCCGCCTTCACGCTGGGCCACGCGCTGATGGAAACCGGGCTAGCGCCGCATATCGGCTGGTGCGGCAAGGCGCT GATCGTGGAGGTGGACGAGGATTTCTTCGGACAGGACGAGGACGAGCAGACCGCCCGGCTGGACGCGCAACTGGCGGCGC GGCTGGACGACGATGGTTTCCTCGCCAGCCCGCGCGCGCTGTGCCCGCTGCCGCTCTTGGGCATTCCGGGCTGGTGGCCG GACAACGAAGACCCGGCCTTCTACGACAATGCCGATTATTTCCGGCCGACGCGCCGCGCCAAATCGGCCACCGTCACCGC CTGA
Upstream 100 bases:
>100_bases CTGTACCAGGCCAAGCGCGACGGCCGCAACCGCGTCAGCGGCGCGGCGCCCGCCCATTGCGGCTAGAATGCCGGCTTCGA CCGCATCCCTCTGCTTTCCC
Downstream 100 bases:
>100_bases AGCTGCTCGGTCAGCGGCCCCAGCAGCTCGGCCAGGGTCGCATCCAGCGCATCCCCCGCGCTGGCGTCGCGGCGATAGAC GAAGATCTGGAATAGGTCGG
Product: transmembrane protein
Products: NA
Alternate protein names: Putative Transmembrane Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNRWHTDYLSHPLYRPTRRFLPALAGWPDQAGYDALLARARAAGSPLPAGLRFVCGLEPDGYYETHIGATGEVPTRAENW HDWFNALAWLAWPRSKAALNRRHVRAIGRGEVKRGPLRDAATLLDECGVVVATADPQLGQLLDDMRWQALFIERRQDWGR RIAAFTLGHALMETGLAPHIGWCGKALIVEVDEDFFGQDEDEQTARLDAQLAARLDDDGFLASPRALCPLPLLGIPGWWP DNEDPAFYDNADYFRPTRRAKSATVTA
Sequences:
>Translated_267_residues MNRWHTDYLSHPLYRPTRRFLPALAGWPDQAGYDALLARARAAGSPLPAGLRFVCGLEPDGYYETHIGATGEVPTRAENW HDWFNALAWLAWPRSKAALNRRHVRAIGRGEVKRGPLRDAATLLDECGVVVATADPQLGQLLDDMRWQALFIERRQDWGR RIAAFTLGHALMETGLAPHIGWCGKALIVEVDEDFFGQDEDEQTARLDAQLAARLDDDGFLASPRALCPLPLLGIPGWWP DNEDPAFYDNADYFRPTRRAKSATVTA >Mature_267_residues MNRWHTDYLSHPLYRPTRRFLPALAGWPDQAGYDALLARARAAGSPLPAGLRFVCGLEPDGYYETHIGATGEVPTRAENW HDWFNALAWLAWPRSKAALNRRHVRAIGRGEVKRGPLRDAATLLDECGVVVATADPQLGQLLDDMRWQALFIERRQDWGR RIAAFTLGHALMETGLAPHIGWCGKALIVEVDEDFFGQDEDEQTARLDAQLAARLDDDGFLASPRALCPLPLLGIPGWWP DNEDPAFYDNADYFRPTRRAKSATVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29898; Mature: 29898
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRWHTDYLSHPLYRPTRRFLPALAGWPDQAGYDALLARARAAGSPLPAGLRFVCGLEPD CCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC GYYETHIGATGEVPTRAENWHDWFNALAWLAWPRSKAALNRRHVRAIGRGEVKRGPLRDA CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHH ATLLDECGVVVATADPQLGQLLDDMRWQALFIERRQDWGRRIAAFTLGHALMETGLAPHI HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GWCGKALIVEVDEDFFGQDEDEQTARLDAQLAARLDDDGFLASPRALCPLPLLGIPGWWP CCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DNEDPAFYDNADYFRPTRRAKSATVTA CCCCCCCCCCCCHHCHHHHHCCCCCCC >Mature Secondary Structure MNRWHTDYLSHPLYRPTRRFLPALAGWPDQAGYDALLARARAAGSPLPAGLRFVCGLEPD CCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC GYYETHIGATGEVPTRAENWHDWFNALAWLAWPRSKAALNRRHVRAIGRGEVKRGPLRDA CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHH ATLLDECGVVVATADPQLGQLLDDMRWQALFIERRQDWGRRIAAFTLGHALMETGLAPHI HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GWCGKALIVEVDEDFFGQDEDEQTARLDAQLAARLDDDGFLASPRALCPLPLLGIPGWWP CCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DNEDPAFYDNADYFRPTRRAKSATVTA CCCCCCCCCCCCHHCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA