| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ampG [C]
Identifier: 34496238
GI number: 34496238
Start: 808484
End: 809761
Strand: Reverse
Name: ampG [C]
Synonym: CV_0783
Alternate gene names: 34496238
Gene position: 809761-808484 (Counterclockwise)
Preceding gene: 34496239
Following gene: 34496233
Centisome position: 17.04
GC content: 67.76
Gene sequence:
>1278_bases ATGACCCTGGCCACCATCAACTGGCGGCGCGACGTGTTCTCGCGCACCATGCTCGTCTGCGTGTTCACCGGCTTCGCCTC CGGCCTGCCGCTGTACACCCTGATCAATTTGCTGCCGGCCTGGCTGCGCAGCGAAGGCGTCGATCTCAAGTCCATCGGCC TGTTCGCGCTGATCGGCCTGCCCTACACCTGGAAATTCCTGTGGTCGCCGCTGCTGGACCGTTTCGCGCTGCCGCTGCTG GGCCGCCGCCGCGGCTGGATGCTGGCCACCCAGCTGGCGCTGCTGGCCGGCCTCGCGCTGCTCGGCCTATTTGATCCGCG AGAGGACATCTGGAGCATCGCCGGCCTGGCGCTGGCGGTCGCCTTCTTCTCCGCCAGCCAGGACATCGTGCTGGACGCCT TTCGCCGCGAGATTCTCAGCGACGCCCAGCTCGGCCTCGGCAATACCGTCCACATCAACGCCTACCGGCTGGCCGGCCTG GTGCCGGGCTCTCTGTCGCTGATCCTGGCCGACCACCTGGACTGGGCCAGCGTGTTCGTGGTCACCGCGCTGTTCATGCT GCCGGGCGCGCTGATGACGCTGATGGTGAAGGAGCCGGCGCTGGCCTCGGGCAGCCCGAAAACGCTGCGCGAGGCGGTGG TGGAGCCTTTCCACGAATTCCTCACCCGCCAGGGCTGGCAAGGCGCGCTGTGGATACTGGGCTTCATCTTCCTGTACAAG CTGGGCGACAGCATGGCCACCTCGCTGGCCACGCCGTTCTATCTCGACATGGGCTACGCCAAGTCGCAGATCGGCCTGGT GGCCAAGCACGCGGCGCTGTGGCCTGCCGTGGCCGGCGGCTTGCTCGGCGGGCTATGGATGATCAAGCTGGGCATCAACC GAGCGCTGTGGGCCTTCGGCGTGGTGCAGGTGGTGTCGATACTCGGCTTCGCCTGGCTATCCAGCTACGGCCGCTTCGAC AACATCGGCGCGTCCGAGCTTTCCATGCTGGCGGTGGTGATCGGCTTCGAGGCGCTGGGCGTAGGCCTCGGCACCGCGGC CTTCGTCGCCTTCATCGCCCGCAGCACCCACCCGGCCTACACCGCCACCCAGTTCGCGCTGTTCACCAGCCTGGCCGCGG TGCCGCGCACGCTGGCTAACGCCGCCACCGGCTACATCGTCGACTCGGTGGGTTGGACCTCGTTCTTCTTCCTGTGCACG GCGCTGGCCCTGCCCGGCATGATGCTGCTGGTACGGGTGGCGCCCTGGGGCGACGATCCCGCGCCGGAAAAAGCCTGA
Upstream 100 bases:
>100_bases CGGCGCTGAAACCGCCCCCGACGGGCTCCGCGCCCGCCTCCGCCGACCTCCGCCCGCCCGCAAGCGCGGGCGGCCCGTCC ACCACCACGACAACAAGCAC
Downstream 100 bases:
>100_bases GAACGCGCCGCCGGCTCCGGCTACAGCCGGCAGTTCTCGACGCCGTCCTCCTGCCGGCACTGGCGGATATTGCCATCCTG GTCCAGCTTCAGCAGCCATT
Product: major facilitator superfamily muropeptide transporter
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTLATINWRRDVFSRTMLVCVFTGFASGLPLYTLINLLPAWLRSEGVDLKSIGLFALIGLPYTWKFLWSPLLDRFALPLL GRRRGWMLATQLALLAGLALLGLFDPREDIWSIAGLALAVAFFSASQDIVLDAFRREILSDAQLGLGNTVHINAYRLAGL VPGSLSLILADHLDWASVFVVTALFMLPGALMTLMVKEPALASGSPKTLREAVVEPFHEFLTRQGWQGALWILGFIFLYK LGDSMATSLATPFYLDMGYAKSQIGLVAKHAALWPAVAGGLLGGLWMIKLGINRALWAFGVVQVVSILGFAWLSSYGRFD NIGASELSMLAVVIGFEALGVGLGTAAFVAFIARSTHPAYTATQFALFTSLAAVPRTLANAATGYIVDSVGWTSFFFLCT ALALPGMMLLVRVAPWGDDPAPEKA
Sequences:
>Translated_425_residues MTLATINWRRDVFSRTMLVCVFTGFASGLPLYTLINLLPAWLRSEGVDLKSIGLFALIGLPYTWKFLWSPLLDRFALPLL GRRRGWMLATQLALLAGLALLGLFDPREDIWSIAGLALAVAFFSASQDIVLDAFRREILSDAQLGLGNTVHINAYRLAGL VPGSLSLILADHLDWASVFVVTALFMLPGALMTLMVKEPALASGSPKTLREAVVEPFHEFLTRQGWQGALWILGFIFLYK LGDSMATSLATPFYLDMGYAKSQIGLVAKHAALWPAVAGGLLGGLWMIKLGINRALWAFGVVQVVSILGFAWLSSYGRFD NIGASELSMLAVVIGFEALGVGLGTAAFVAFIARSTHPAYTATQFALFTSLAAVPRTLANAATGYIVDSVGWTSFFFLCT ALALPGMMLLVRVAPWGDDPAPEKA >Mature_424_residues TLATINWRRDVFSRTMLVCVFTGFASGLPLYTLINLLPAWLRSEGVDLKSIGLFALIGLPYTWKFLWSPLLDRFALPLLG RRRGWMLATQLALLAGLALLGLFDPREDIWSIAGLALAVAFFSASQDIVLDAFRREILSDAQLGLGNTVHINAYRLAGLV PGSLSLILADHLDWASVFVVTALFMLPGALMTLMVKEPALASGSPKTLREAVVEPFHEFLTRQGWQGALWILGFIFLYKL GDSMATSLATPFYLDMGYAKSQIGLVAKHAALWPAVAGGLLGGLWMIKLGINRALWAFGVVQVVSILGFAWLSSYGRFDN IGASELSMLAVVIGFEALGVGLGTAAFVAFIARSTHPAYTATQFALFTSLAAVPRTLANAATGYIVDSVGWTSFFFLCTA LALPGMMLLVRVAPWGDDPAPEKA
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli AmpG and yeast YBR220c [H]
Homologues:
Organism=Homo sapiens, GI19923957, Length=272, Percent_Identity=31.6176470588235, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1786636, Length=390, Percent_Identity=41.5384615384615, Blast_Score=271, Evalue=5e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45942; Mature: 45810
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLATINWRRDVFSRTMLVCVFTGFASGLPLYTLINLLPAWLRSEGVDLKSIGLFALIGL CCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC PYTWKFLWSPLLDRFALPLLGRRRGWMLATQLALLAGLALLGLFDPREDIWSIAGLALAV CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AFFSASQDIVLDAFRREILSDAQLGLGNTVHINAYRLAGLVPGSLSLILADHLDWASVFV HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCHHHHHHHHCCCHHHHHH VTALFMLPGALMTLMVKEPALASGSPKTLREAVVEPFHEFLTRQGWQGALWILGFIFLYK HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LGDSMATSLATPFYLDMGYAKSQIGLVAKHAALWPAVAGGLLGGLWMIKLGINRALWAFG HHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVQVVSILGFAWLSSYGRFDNIGASELSMLAVVIGFEALGVGLGTAAFVAFIARSTHPAY HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH TATQFALFTSLAAVPRTLANAATGYIVDSVGWTSFFFLCTALALPGMMLLVRVAPWGDDP HHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCC APEKA CCCCC >Mature Secondary Structure TLATINWRRDVFSRTMLVCVFTGFASGLPLYTLINLLPAWLRSEGVDLKSIGLFALIGL CEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC PYTWKFLWSPLLDRFALPLLGRRRGWMLATQLALLAGLALLGLFDPREDIWSIAGLALAV CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AFFSASQDIVLDAFRREILSDAQLGLGNTVHINAYRLAGLVPGSLSLILADHLDWASVFV HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCHHHHHHHHCCCHHHHHH VTALFMLPGALMTLMVKEPALASGSPKTLREAVVEPFHEFLTRQGWQGALWILGFIFLYK HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LGDSMATSLATPFYLDMGYAKSQIGLVAKHAALWPAVAGGLLGGLWMIKLGINRALWAFG HHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVQVVSILGFAWLSSYGRFDNIGASELSMLAVVIGFEALGVGLGTAAFVAFIARSTHPAY HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCH TATQFALFTSLAAVPRTLANAATGYIVDSVGWTSFFFLCTALALPGMMLLVRVAPWGDDP HHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCC APEKA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1956282; 7542800 [H]