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The map label for this gene is arnT [H]

Identifier: 34496207

GI number: 34496207

Start: 771850

End: 773511

Strand: Reverse

Name: arnT [H]

Synonym: CV_0752

Alternate gene names: 34496207

Gene position: 773511-771850 (Counterclockwise)

Preceding gene: 34496212

Following gene: 34496206

Centisome position: 16.28

GC content: 67.51

Gene sequence:

>1662_bases
ATGAGCCAGACCTCCGCTATTCATTCCGGCCCGATTGCCCGCAAGATCGAACCCGCCCTGTGGCTGCTGTTCGCGCTGAT
ATGGTTCGGCAGCCTGGGCTACCGCGGCCTGATCCACGCCGACGAGGGCCGCTATGCGACGATTTCATTGTTCATGCTGC
ACAGCGGCGACTGGGTCACGCCCCGCCTCAACGGCCTGCTGTATTTCGAGAAACCCATCCTGCAGTACTGGATGGGCGCG
CTCAGCTTCGCCGCCTTCGGCGTCAACGAGTTCGCCGCCCGCTTCTGGCCGGGGCTGACCGGCTTCCTCAGCGTGGCCGC
GGTGTCGCTGACGGCGCGCCGGCTGTGGGGCACCGAAGCCGGCCGCCACGCCGCGCTGGCCGCCGGCGGCATGGCCTGGA
TCGTCGCCAACAGCCACTTCCTGTCGCTGGACATGGGCGTCAGCTTCTTCCTCACTGCGGCGCTGTGCGGCTTCCTGCTG
GCGCAGCGCGCGGAAGCCAGCCGCGAGGAAACCCGCTGGGCGATGTGGCTGACCTGGGCGGCGATGGCCGGCGCCACGCT
CAGCAAGGGCCTGATCGGCCTGTTGATCCCCGGCGCCACGCTGGTGCTGTACAGCCTGGTCAACTGGCAATGGTCGTTCT
GGAAACGGATGCACTGGATCAGCGGCCTCGCGCTGTTTCTCGCGCTGACCGCGCCGTGGTTCGTCCTGGTGTCCGAACGC
AACCCTGACTTCGCCCGCTTCTTCTTCATCCGCGAGCATTTCGAACGCTTCCTCACCACCGAGCACAAGCGGACCGGCGC
GCCGTGGTATTTCGTCCCCTACCTGATCCTGGGCCTGCTGCCGTGGACCACGCTGCTGCCGCGGATCGTCCGCGACGCCT
GGGCCGACCGCGCGTCCAGCCTGCGCATCGGCCGCCTGCTGCTGATCTGGTGCGTGTTCATCTTCGCCTTCTTCAGCAAG
TCCAGCTCCAAGCTGCCGTCCTACATCCTGCCGATGTTCCCGGCGCTGGCGCTGATGCTGGCGCACAGCCTGCCGCGGAT
GGCGCCGGGCGAGCTGAAAAAACATATCGTCCTGCCCGCGCTGCTCTGGCTGGCGCTGCTCGCCGCCTGGCCGTTCGCCG
GCCGCTTCGCCAATGCCGATTCGCCGCCGGAGGTGATTCTGCCCTTCGCCCGCTTCATCGCCGCCGGCGCGGCCGCATTC
CTGATCGCGGCGCTCTTCGCCTGGCGCGCGCTGGGAAGGGGGAAGATGCTGGCGGCGCTGGCGGCGCTGGCCTTCGGCAG
CCTGGCCGCAGTGACGCTGGCCGCCAGCGGCCACGACAGCTACGGCCGGCTCAAGGGCAGCAAGGAAATCGTCAGGCAGA
TCCAGCCCTATCTGGCGCCGGACAGCGAAATCTACTCGGTCCGCTACTACGATCAGACCTTCCCCTACTATGTCGGCCGG
CCGGTGACGCTGGTGGACTTCGTCGACGAGTTCGAGTTCGGCGAGGGACAGGAGCCGCAGCGCTGGATGCCGCGCATCGA
GCAGTTCGCCGAACGCTGGCGCGCCGCGCCCAAGGCGGTGGCGATGATGAGCGACGACACCTATTCGCTGTTGCGGCGGC
AAGGGCTGTCGATGAAAGTAATCTATCAGGACCCGCGGCGCATGGTGGTGGCGAAGCCCTAG

Upstream 100 bases:

>100_bases
CCCCGGCGCGGTCACACAGCGCACACTTACAAAGCATGGGGGATGAGGTATCCTATTGGATTGGACACCACCGCAAGCCG
ACGCCACTCCCTCGTTCAAG

Downstream 100 bases:

>100_bases
CTTCAGCTTCTTCTGAAGGCTGGATCGAGAAGATACTTGGATAAGAATGCATGAAGCTGATTGAATTCGGATTGATACTG
TTCGGCGTGCTGCTCAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MSQTSAIHSGPIARKIEPALWLLFALIWFGSLGYRGLIHADEGRYATISLFMLHSGDWVTPRLNGLLYFEKPILQYWMGA
LSFAAFGVNEFAARFWPGLTGFLSVAAVSLTARRLWGTEAGRHAALAAGGMAWIVANSHFLSLDMGVSFFLTAALCGFLL
AQRAEASREETRWAMWLTWAAMAGATLSKGLIGLLIPGATLVLYSLVNWQWSFWKRMHWISGLALFLALTAPWFVLVSER
NPDFARFFFIREHFERFLTTEHKRTGAPWYFVPYLILGLLPWTTLLPRIVRDAWADRASSLRIGRLLLIWCVFIFAFFSK
SSSKLPSYILPMFPALALMLAHSLPRMAPGELKKHIVLPALLWLALLAAWPFAGRFANADSPPEVILPFARFIAAGAAAF
LIAALFAWRALGRGKMLAALAALAFGSLAAVTLAASGHDSYGRLKGSKEIVRQIQPYLAPDSEIYSVRYYDQTFPYYVGR
PVTLVDFVDEFEFGEGQEPQRWMPRIEQFAERWRAAPKAVAMMSDDTYSLLRRQGLSMKVIYQDPRRMVVAKP

Sequences:

>Translated_553_residues
MSQTSAIHSGPIARKIEPALWLLFALIWFGSLGYRGLIHADEGRYATISLFMLHSGDWVTPRLNGLLYFEKPILQYWMGA
LSFAAFGVNEFAARFWPGLTGFLSVAAVSLTARRLWGTEAGRHAALAAGGMAWIVANSHFLSLDMGVSFFLTAALCGFLL
AQRAEASREETRWAMWLTWAAMAGATLSKGLIGLLIPGATLVLYSLVNWQWSFWKRMHWISGLALFLALTAPWFVLVSER
NPDFARFFFIREHFERFLTTEHKRTGAPWYFVPYLILGLLPWTTLLPRIVRDAWADRASSLRIGRLLLIWCVFIFAFFSK
SSSKLPSYILPMFPALALMLAHSLPRMAPGELKKHIVLPALLWLALLAAWPFAGRFANADSPPEVILPFARFIAAGAAAF
LIAALFAWRALGRGKMLAALAALAFGSLAAVTLAASGHDSYGRLKGSKEIVRQIQPYLAPDSEIYSVRYYDQTFPYYVGR
PVTLVDFVDEFEFGEGQEPQRWMPRIEQFAERWRAAPKAVAMMSDDTYSLLRRQGLSMKVIYQDPRRMVVAKP
>Mature_552_residues
SQTSAIHSGPIARKIEPALWLLFALIWFGSLGYRGLIHADEGRYATISLFMLHSGDWVTPRLNGLLYFEKPILQYWMGAL
SFAAFGVNEFAARFWPGLTGFLSVAAVSLTARRLWGTEAGRHAALAAGGMAWIVANSHFLSLDMGVSFFLTAALCGFLLA
QRAEASREETRWAMWLTWAAMAGATLSKGLIGLLIPGATLVLYSLVNWQWSFWKRMHWISGLALFLALTAPWFVLVSERN
PDFARFFFIREHFERFLTTEHKRTGAPWYFVPYLILGLLPWTTLLPRIVRDAWADRASSLRIGRLLLIWCVFIFAFFSKS
SSKLPSYILPMFPALALMLAHSLPRMAPGELKKHIVLPALLWLALLAAWPFAGRFANADSPPEVILPFARFIAAGAAAFL
IAALFAWRALGRGKMLAALAALAFGSLAAVTLAASGHDSYGRLKGSKEIVRQIQPYLAPDSEIYSVRYYDQTFPYYVGRP
VTLVDFVDEFEFGEGQEPQRWMPRIEQFAERWRAAPKAVAMMSDDTYSLLRRQGLSMKVIYQDPRRMVVAKP

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=311, Percent_Identity=33.7620578778135, Blast_Score=158, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 62110; Mature: 61979

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSAIHSGPIARKIEPALWLLFALIWFGSLGYRGLIHADEGRYATISLFMLHSGDWVT
CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCC
PRLNGLLYFEKPILQYWMGALSFAAFGVNEFAARFWPGLTGFLSVAAVSLTARRLWGTEA
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
GRHAALAAGGMAWIVANSHFLSLDMGVSFFLTAALCGFLLAQRAEASREETRWAMWLTWA
CCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAGATLSKGLIGLLIPGATLVLYSLVNWQWSFWKRMHWISGLALFLALTAPWFVLVSER
HHHHHHHHCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
NPDFARFFFIREHFERFLTTEHKRTGAPWYFVPYLILGLLPWTTLLPRIVRDAWADRASS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LRIGRLLLIWCVFIFAFFSKSSSKLPSYILPMFPALALMLAHSLPRMAPGELKKHIVLPA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLWLALLAAWPFAGRFANADSPPEVILPFARFIAAGAAAFLIAALFAWRALGRGKMLAAL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AALAFGSLAAVTLAASGHDSYGRLKGSKEIVRQIQPYLAPDSEIYSVRYYDQTFPYYVGR
HHHHHHHHHHHHEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
PVTLVDFVDEFEFGEGQEPQRWMPRIEQFAERWRAAPKAVAMMSDDTYSLLRRQGLSMKV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHCCCCEEE
IYQDPRRMVVAKP
EEECCCEEEEECC
>Mature Secondary Structure 
SQTSAIHSGPIARKIEPALWLLFALIWFGSLGYRGLIHADEGRYATISLFMLHSGDWVT
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCC
PRLNGLLYFEKPILQYWMGALSFAAFGVNEFAARFWPGLTGFLSVAAVSLTARRLWGTEA
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
GRHAALAAGGMAWIVANSHFLSLDMGVSFFLTAALCGFLLAQRAEASREETRWAMWLTWA
CCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAGATLSKGLIGLLIPGATLVLYSLVNWQWSFWKRMHWISGLALFLALTAPWFVLVSER
HHHHHHHHCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
NPDFARFFFIREHFERFLTTEHKRTGAPWYFVPYLILGLLPWTTLLPRIVRDAWADRASS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LRIGRLLLIWCVFIFAFFSKSSSKLPSYILPMFPALALMLAHSLPRMAPGELKKHIVLPA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLWLALLAAWPFAGRFANADSPPEVILPFARFIAAGAAAFLIAALFAWRALGRGKMLAAL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AALAFGSLAAVTLAASGHDSYGRLKGSKEIVRQIQPYLAPDSEIYSVRYYDQTFPYYVGR
HHHHHHHHHHHHEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
PVTLVDFVDEFEFGEGQEPQRWMPRIEQFAERWRAAPKAVAMMSDDTYSLLRRQGLSMKV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHCCCCEEE
IYQDPRRMVVAKP
EEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA