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The map label for this gene is 34496192

Identifier: 34496192

GI number: 34496192

Start: 758202

End: 758828

Strand: Reverse

Name: 34496192

Synonym: CV_0737

Alternate gene names: NA

Gene position: 758828-758202 (Counterclockwise)

Preceding gene: 34496193

Following gene: 34496191

Centisome position: 15.97

GC content: 66.67

Gene sequence:

>627_bases
ATGCAAAGCTTCTCCATGGTCTGGCGGGAAATACACGCCAAACTGCAACGCCGCGCCCGCCACCTGTGCAAGGGCGACGT
CCACCGCGCCGACGAGTTGTTGTCCGATACCGCCTTCAAGGTGCATCTCTACCTGCAGCATTCCCCCGGCCGGGTGCAGA
ACCTGGCCGGCTTCATGTTCCTGGCGCTCAACCACGCCTTCCTGGACCTGAAGCGCCGCCAGGGCCGGGAAATCAAGGTC
ATCGATCCCGATTCAGACCCGAGCGGCGACCAGGCCCAGGCCTGCGCCGGCCTGGGCCCCACGCCGGAACAGCAGTTGTC
ATCGCGGCAGCAGCTGGCCGAACTGGAATGCGCGTTCGCCGCCTTGAAGCCGGACCAGCAGCGGCTGTTCCAGCTGAAGT
TCGAACAGGACCTTTCTTACGCCCAGATCGCCGCGCGGCTCGGCATCAACGAGGCGCTGGCCCGCAAGCGGGTGGAGCTG
CTGCGCAAGGCGTTGCGCAGGCAGCTGGACCCCGATTTCACGCCCCCCGACAACCGCCGTCCGTGTCAGCAGCAGCGCGG
GCGGCTTTCCGCCGCCAACGCCCGACACCACACCGCCTCCGCCGACGACAAGGACAAAGCCGCATGA

Upstream 100 bases:

>100_bases
TATCTTTAACAGACAAAACATTCATTTGTCACCAAAGAAACAGTGCCGCCTTGCGTGTTACCCCATCCTGCAATCCCAAC
TGTCATAAAGGATGGCCACC

Downstream 100 bases:

>100_bases
AACCCTTTCCGCACATGATTCCGCTCCGGCTGGCCCGCTGGCTGCGCCTCCGGCTATCCCGGCCGCAGGCAGCGACGCCA
CCCGCGCGGAAAGGCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MQSFSMVWREIHAKLQRRARHLCKGDVHRADELLSDTAFKVHLYLQHSPGRVQNLAGFMFLALNHAFLDLKRRQGREIKV
IDPDSDPSGDQAQACAGLGPTPEQQLSSRQQLAELECAFAALKPDQQRLFQLKFEQDLSYAQIAARLGINEALARKRVEL
LRKALRRQLDPDFTPPDNRRPCQQQRGRLSAANARHHTASADDKDKAA

Sequences:

>Translated_208_residues
MQSFSMVWREIHAKLQRRARHLCKGDVHRADELLSDTAFKVHLYLQHSPGRVQNLAGFMFLALNHAFLDLKRRQGREIKV
IDPDSDPSGDQAQACAGLGPTPEQQLSSRQQLAELECAFAALKPDQQRLFQLKFEQDLSYAQIAARLGINEALARKRVEL
LRKALRRQLDPDFTPPDNRRPCQQQRGRLSAANARHHTASADDKDKAA
>Mature_208_residues
MQSFSMVWREIHAKLQRRARHLCKGDVHRADELLSDTAFKVHLYLQHSPGRVQNLAGFMFLALNHAFLDLKRRQGREIKV
IDPDSDPSGDQAQACAGLGPTPEQQLSSRQQLAELECAFAALKPDQQRLFQLKFEQDLSYAQIAARLGINEALARKRVEL
LRKALRRQLDPDFTPPDNRRPCQQQRGRLSAANARHHTASADDKDKAA

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23610; Mature: 23610

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFSMVWREIHAKLQRRARHLCKGDVHRADELLSDTAFKVHLYLQHSPGRVQNLAGFMF
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHH
LALNHAFLDLKRRQGREIKVIDPDSDPSGDQAQACAGLGPTPEQQLSSRQQLAELECAFA
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ALKPDQQRLFQLKFEQDLSYAQIAARLGINEALARKRVELLRKALRRQLDPDFTPPDNRR
HCCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PCQQQRGRLSAANARHHTASADDKDKAA
CHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSFSMVWREIHAKLQRRARHLCKGDVHRADELLSDTAFKVHLYLQHSPGRVQNLAGFMF
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHH
LALNHAFLDLKRRQGREIKVIDPDSDPSGDQAQACAGLGPTPEQQLSSRQQLAELECAFA
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ALKPDQQRLFQLKFEQDLSYAQIAARLGINEALARKRVELLRKALRRQLDPDFTPPDNRR
HCCCCHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PCQQQRGRLSAANARHHTASADDKDKAA
CHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA