| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496191
Identifier: 34496191
GI number: 34496191
Start: 757493
End: 757999
Strand: Reverse
Name: 34496191
Synonym: CV_0736
Alternate gene names: NA
Gene position: 757999-757493 (Counterclockwise)
Preceding gene: 34496192
Following gene: 34496190
Centisome position: 15.95
GC content: 64.69
Gene sequence:
>507_bases ATGACCGCCAAACTGGGCAATCTGATCGGCGGACTGAAAAGAGCGGTGATCGAGGCGCAACGCTGCGTCTGCCATCAGCA CATAGAGGAACTGCAGCAGTTCTTCATTCCCGACCAGGAGCAGGATCCGGCGCAAAACTTCCCCGAGGGCGCCTGGACCG CGCGCATGGTGGGCATGAACGTGCCGCGCGAGGTGAGCCGCAACGGCGTGGTCGCGATGGAGCACCACCAGGTCCAGGTG CCGCTGATCACGCTGCTGCCGCTGAAAAGCTTCGCCATCGAGAAAGTGGAGGTGCTGACCACGCTCAACCTGTCGTTGGC CGAAACCGCCGATGGCGAGCCGGACGCGGACGATGCGACCGCCGCCGAGGTGTTGGTCTCCATGCGCCAGCAGGATGAGC AGACCGCGGAGATCAAGATCGTCATCCAGGGCCTGGAGCCGCCCGCCGGCTACCTGCGCGTGGTGGCCGCCTACGAAAAG CTGCTGAACGCGCAGTTGCCCGCCTGA
Upstream 100 bases:
>100_bases CCGCCGCCCCCTTCGCGGCCGATAAGCGCCGGAGCCGGCTGGACAGGCTGGAACGCCTGCCGCGGCTAGCACTGTCCTCA CCCGTCAAGGAGCGCCTGAC
Downstream 100 bases:
>100_bases ACGCCGCCTCCTCACCTCTGTTGCCAAGAAAGGAAACACCATGGCCGAGACCTCGGACAACAATCTGTTAAGCATGGCCC AGCAGTTTTCCGGCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTAKLGNLIGGLKRAVIEAQRCVCHQHIEELQQFFIPDQEQDPAQNFPEGAWTARMVGMNVPREVSRNGVVAMEHHQVQV PLITLLPLKSFAIEKVEVLTTLNLSLAETADGEPDADDATAAEVLVSMRQQDEQTAEIKIVIQGLEPPAGYLRVVAAYEK LLNAQLPA
Sequences:
>Translated_168_residues MTAKLGNLIGGLKRAVIEAQRCVCHQHIEELQQFFIPDQEQDPAQNFPEGAWTARMVGMNVPREVSRNGVVAMEHHQVQV PLITLLPLKSFAIEKVEVLTTLNLSLAETADGEPDADDATAAEVLVSMRQQDEQTAEIKIVIQGLEPPAGYLRVVAAYEK LLNAQLPA >Mature_167_residues TAKLGNLIGGLKRAVIEAQRCVCHQHIEELQQFFIPDQEQDPAQNFPEGAWTARMVGMNVPREVSRNGVVAMEHHQVQVP LITLLPLKSFAIEKVEVLTTLNLSLAETADGEPDADDATAAEVLVSMRQQDEQTAEIKIVIQGLEPPAGYLRVVAAYEKL LNAQLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18447; Mature: 18316
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKLGNLIGGLKRAVIEAQRCVCHQHIEELQQFFIPDQEQDPAQNFPEGAWTARMVGMN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHCCC VPREVSRNGVVAMEHHQVQVPLITLLPLKSFAIEKVEVLTTLNLSLAETADGEPDADDAT CCHHHCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHH AAEVLVSMRQQDEQTAEIKIVIQGLEPPAGYLRVVAAYEKLLNAQLPA HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAKLGNLIGGLKRAVIEAQRCVCHQHIEELQQFFIPDQEQDPAQNFPEGAWTARMVGMN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHCCC VPREVSRNGVVAMEHHQVQVPLITLLPLKSFAIEKVEVLTTLNLSLAETADGEPDADDAT CCHHHCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHH AAEVLVSMRQQDEQTAEIKIVIQGLEPPAGYLRVVAAYEKLLNAQLPA HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA