| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496037
Identifier: 34496037
GI number: 34496037
Start: 621636
End: 622151
Strand: Reverse
Name: 34496037
Synonym: CV_0582
Alternate gene names: NA
Gene position: 622151-621636 (Counterclockwise)
Preceding gene: 34496038
Following gene: 34496035
Centisome position: 13.09
GC content: 66.86
Gene sequence:
>516_bases ATGACCGAACTCGCCGTCCCCAGTCTCGCCCGCTGCCTCGCCAGCCTGTTCTACGAATCGCTGCTGATCATCGCCATGCT GCTGATCACCAGCGCCGCGATCACTCCGCTGCAGCTGGCGCTGGGCCAAGACGCCTGGCTGCTGCACAGCCTGATCCAGT TGGCCGCCGCCGGCGTGCTGTTCGCCTATTTCGGCTATTGCTGGACCCGCAGCGGCCAGACCGCGGCGATGAAGACCTGG CACATCCGGCTGGTGACCGCCGACGGCCGGCTGCTCAACTGGCAGCAGGCGCTGATGCGCTTCGCCGTCGCGGCGATGCT GTTCGTCGGCTTGCCGGTGATCTCCTATCTGGGATGGCAGCGCAGCTACGGCGACCATCCGGCGGCGAAATGGCTGGCGC TGGTCTGGTGGCTGGTGCCCTTTCTGGCCCGCTACTACGACAAGGACCGCCGCCACCTGCACGACCGCCTGTCCGGCACC CGGCTGGAACTGCTGCCCAAGCCGGTTCGGAAATAA
Upstream 100 bases:
>100_bases CCAACTGGAAAAAACTGCAGCAACTGCCGCCCGGGCAACGCGAACTCGCGTTGCGCCGGTTGCGCTCGCACACCGCCAAA CCACCCGCCGCCTCCGCCCC
Downstream 100 bases:
>100_bases AGCCGGCGACGGCGCGCCTCAAGACCGCAGCAGCGGCTCCTCGGCCGCGAATTCCAGCAAGATGTCCAGCAACGCCCGCA CCCGGGCCGGCATCGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: RDD Family Protein; Transmembrane Protein; RDD Family; RDD Domain Protein; RDD Domain-Containing Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTELAVPSLARCLASLFYESLLIIAMLLITSAAITPLQLALGQDAWLLHSLIQLAAAGVLFAYFGYCWTRSGQTAAMKTW HIRLVTADGRLLNWQQALMRFAVAAMLFVGLPVISYLGWQRSYGDHPAAKWLALVWWLVPFLARYYDKDRRHLHDRLSGT RLELLPKPVRK
Sequences:
>Translated_171_residues MTELAVPSLARCLASLFYESLLIIAMLLITSAAITPLQLALGQDAWLLHSLIQLAAAGVLFAYFGYCWTRSGQTAAMKTW HIRLVTADGRLLNWQQALMRFAVAAMLFVGLPVISYLGWQRSYGDHPAAKWLALVWWLVPFLARYYDKDRRHLHDRLSGT RLELLPKPVRK >Mature_170_residues TELAVPSLARCLASLFYESLLIIAMLLITSAAITPLQLALGQDAWLLHSLIQLAAAGVLFAYFGYCWTRSGQTAAMKTWH IRLVTADGRLLNWQQALMRFAVAAMLFVGLPVISYLGWQRSYGDHPAAKWLALVWWLVPFLARYYDKDRRHLHDRLSGTR LELLPKPVRK
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19411; Mature: 19280
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELAVPSLARCLASLFYESLLIIAMLLITSAAITPLQLALGQDAWLLHSLIQLAAAGVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FAYFGYCWTRSGQTAAMKTWHIRLVTADGRLLNWQQALMRFAVAAMLFVGLPVISYLGWQ HHHHHHHHCCCCCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSYGDHPAAKWLALVWWLVPFLARYYDKDRRHLHDRLSGTRLELLPKPVRK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure TELAVPSLARCLASLFYESLLIIAMLLITSAAITPLQLALGQDAWLLHSLIQLAAAGVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FAYFGYCWTRSGQTAAMKTWHIRLVTADGRLLNWQQALMRFAVAAMLFVGLPVISYLGWQ HHHHHHHHCCCCCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSYGDHPAAKWLALVWWLVPFLARYYDKDRRHLHDRLSGTRLELLPKPVRK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA