| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496035
Identifier: 34496035
GI number: 34496035
Start: 620356
End: 620625
Strand: Reverse
Name: 34496035
Synonym: CV_0580
Alternate gene names: NA
Gene position: 620625-620356 (Counterclockwise)
Preceding gene: 34496037
Following gene: 34496034
Centisome position: 13.06
GC content: 68.52
Gene sequence:
>270_bases ATGAGCCTCGCCCTGAGACAACGCCTGCTGTTCTCGCTGCTGATGTCGGCGGCGATGTCTTTCCTGATGACCGCCTGGGT CTGCTGGCTGAACCTGGGCCTGCGTCCGGACTTCATCGGCCGCTGGCTGCACGCCTTCGCCTCCGCCTGGCCCGCCGCCT TCTGCGCGGTGCTGCTGCTGGCGCCGCCCATCCACCGCCTTACACAACGCCTGCTGAGCGGACGCGCACAAGCCGCCGCC GGCCAGCCGGCGCTGAACCAGAAAGGATGA
Upstream 100 bases:
>100_bases ATGATTGCAAAAATGGAATTTGAAATTTATTTTTTGATTCTATTTTCACAATTCGCTCCTGGCTAGACTCGGCTCATCGT TAACCGAACGGAGCGCCATC
Downstream 100 bases:
>100_bases AATCATGAGACTGGACTACACCCAGCTGTCGCCCAAGGCTTATCAGGGATTGCTCGCCTGCAAGAACGCGCTGGCGGAAA GCGGCCTGGGCCTGCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSLALRQRLLFSLLMSAAMSFLMTAWVCWLNLGLRPDFIGRWLHAFASAWPAAFCAVLLLAPPIHRLTQRLLSGRAQAAA GQPALNQKG
Sequences:
>Translated_89_residues MSLALRQRLLFSLLMSAAMSFLMTAWVCWLNLGLRPDFIGRWLHAFASAWPAAFCAVLLLAPPIHRLTQRLLSGRAQAAA GQPALNQKG >Mature_88_residues SLALRQRLLFSLLMSAAMSFLMTAWVCWLNLGLRPDFIGRWLHAFASAWPAAFCAVLLLAPPIHRLTQRLLSGRAQAAAG QPALNQKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9804; Mature: 9673
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLALRQRLLFSLLMSAAMSFLMTAWVCWLNLGLRPDFIGRWLHAFASAWPAAFCAVLLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH APPIHRLTQRLLSGRAQAAAGQPALNQKG CCCHHHHHHHHHCCHHHHHCCCCCCCCCC >Mature Secondary Structure SLALRQRLLFSLLMSAAMSFLMTAWVCWLNLGLRPDFIGRWLHAFASAWPAAFCAVLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH APPIHRLTQRLLSGRAQAAAGQPALNQKG CCCHHHHHHHHHCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA