Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is nadD

Identifier: 34495974

GI number: 34495974

Start: 551028

End: 551666

Strand: Reverse

Name: nadD

Synonym: CV_0519

Alternate gene names: 34495974

Gene position: 551666-551028 (Counterclockwise)

Preceding gene: 34495975

Following gene: 34495973

Centisome position: 11.61

GC content: 71.05

Gene sequence:

>639_bases
ATGAACGCCCGCGTCGGCGTGTTCGGCGGCACCTTCGACCCCGTCCACCACGCCCACCTGCGCATGGCGCGCGCCTTCGC
CGACGAGCTGGCGCTCGACGAAGTGCGGCTGATTCCCGCCGGCCAGCCCTACCACCGGCTGGAAGGGCCGCACGCCAGCG
CGGCCCAGCGCCTGGACATGGTGAAGCTCGCCATCGCCGCCGACGCCAGGCTAGCGGTGGACGAGCGGGAAATCCGCCGC
GCCCGGCCGGCTTACACCGTGGACACCCTGCGCGAGCTTCGCGCCGAGCTGGGCGACGCCGCCGAACTGTGGTTCCTGAT
CGGCGGCGACTCGCTGGCGGCGCTGTCCTCGTGGAAGGACTGGCGCAAACTGTTCCGTCTCGCCAACCTCGCCGTCGCGA
TGCGGCCCGGCTTCGATCCGGCCGCCCTTCCCCCCGAAGTCTTCCAAGAGTGGCAGGCCCGCCAAGTCTCTGATTTTTCA
AATCGAACGGCTTCCGGTACAATCCGCCCCCTGGCCCTGCCGCCGCTCGACCTGTCCGCCACCCGCCTGAGGGCGCGGCT
GGCCGCCGACGAGCCGGTGGACGGCCTGATAGACCCCGCCGTGCTGGCCTACATCCGCCGGCAGCGGCTATACCGGTAA

Upstream 100 bases:

>100_bases
TGCCCAAGGACGTCCCGGTGCACGGCATGGTGATCCACCCGTCCACCGGCCGGCTGGAAGTGGTGATCAACGGCTACGGC
GACGAGGAAGCGCCGGCCGC

Downstream 100 bases:

>100_bases
GGCACCGCCCTACCCGCTCTTTTGGTACCTCTTGCCGGCGCCTGTGCCTGCTATGTACCGGCACAGGAAAAGGAATCATG
GAAATTCAAGAAATCAGCAA

Product: nicotinate-nucleotide adenylyltransferase

Products: NA

Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDMVKLAIAADARLAVDEREIRR
ARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKDWRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFS
NRTASGTIRPLALPPLDLSATRLRARLAADEPVDGLIDPAVLAYIRRQRLYR

Sequences:

>Translated_212_residues
MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDMVKLAIAADARLAVDEREIRR
ARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKDWRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFS
NRTASGTIRPLALPPLDLSATRLRARLAADEPVDGLIDPAVLAYIRRQRLYR
>Mature_212_residues
MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDMVKLAIAADARLAVDEREIRR
ARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKDWRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFS
NRTASGTIRPLALPPLDLSATRLRARLAADEPVDGLIDPAVLAYIRRQRLYR

Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)

COG id: COG1057

COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nadD family

Homologues:

Organism=Escherichia coli, GI1786858, Length=215, Percent_Identity=36.7441860465116, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NADD_CHRVO (Q7P0P7)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_900189.1
- HSSP:   P54455
- ProteinModelPortal:   Q7P0P7
- SMR:   Q7P0P7
- GeneID:   2547854
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_0519
- NMPDR:   fig|243365.1.peg.519
- HOGENOM:   HBG739448
- OMA:   LLGWDAF
- PhylomeDB:   Q7P0P7
- ProtClustDB:   CLSK2485286
- BioCyc:   CVIO243365:CV_0519-MONOMER
- HAMAP:   MF_00244
- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR005248
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR12039
- TIGRFAMs:   TIGR00125
- TIGRFAMs:   TIGR00482

Pfam domain/function: PF01467 CTP_transf_2

EC number: =2.7.7.18

Molecular weight: Translated: 23621; Mature: 23621

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDM
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCHHHHHHHHH
VKLAIAADARLAVDEREIRRARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKD
HHHHHHCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH
WRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFSNRTASGTIRPLALPPLDLSA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHH
TRLRARLAADEPVDGLIDPAVLAYIRRQRLYR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDM
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCHHHHHHHHH
VKLAIAADARLAVDEREIRRARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKD
HHHHHHCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH
WRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFSNRTASGTIRPLALPPLDLSA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHH
TRLRARLAADEPVDGLIDPAVLAYIRRQRLYR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782