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The map label for this gene is 34495840

Identifier: 34495840

GI number: 34495840

Start: 399182

End: 399751

Strand: Reverse

Name: 34495840

Synonym: CV_0385

Alternate gene names: NA

Gene position: 399751-399182 (Counterclockwise)

Preceding gene: 34495847

Following gene: 34495837

Centisome position: 8.41

GC content: 73.51

Gene sequence:

>570_bases
ATGCGTTATCCGGATACGCACAAGGCCCAGACCCGCCGACGCATCGTGGCGATGGCGGCGCTGCGCTTCCGCGCCGAGGG
CCTGTCCAGCGTCGGCATCGCCAACTTGATGGCCGACCTGGGCCTGACCCACGGCGGCTTCTACGCCCATTTCGCCGGCA
AGGACGAACTCGTGGCCGCCGCCTGCGCCGAGGCGCTGCGGCAGATGGCGGATCAATGGCGCTCGCGGCTGGAGCGAAGC
GAGGACGGCGGATGCCTGGCCGCGCTGGCCGAACACTACCTGAGTCCCGCCCATCGCGACTTCCCCGACTCCGGCTGCGC
GGCGGCCGCGCTGGCCGGCGAGATCTCGCGCCAGGACGCGGGCGTGCGCCGATCGTTCGCAGCCGGCCTGGAGCCGCTGC
TGGCGCTGCTGGACGAGGCCAGGCTCAGGGACGGCTCGGGCCCGTCGCCCGAGGCCAGCCTGGCGCTGATGGTGGGCGCG
CTGCTGCTGGCGCGGGCGGTGCCCGACGCCGGCCTGTCGCAGCGTTTCCTGAACGAGGCGCGCGCGGCGCTGCGCGCTCA
GGGAGAATAG

Upstream 100 bases:

>100_bases
TCAGGATCATGATTTATTGATAGCAGCGCCGGCCGTTCGGCTCCAGCATGGCGCCGGCTTGTTTATATTACGAGAATCAT
CTGAACCATCGGGAGACGGC

Downstream 100 bases:

>100_bases
CCGCGCGGCTGCAGGCAGGCCTCGCGCGTTTCCTGCAGCAGGCGCTCGAAGTCGCCGCTGTCCTGCAAGACCTTCAAGCC
GCGGTTGAAGCGTTCGACCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Transcription Regulator Protein; TetR Family Transcription Regulatory Protein; HTH-Type Transcriptional Regulator; TetR Family Regulator; Transcriptional Regulatory Protein TetR Family; TetR/AcrR Family Transcriptional Regulator; Orf_Bo

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRYPDTHKAQTRRRIVAMAALRFRAEGLSSVGIANLMADLGLTHGGFYAHFAGKDELVAAACAEALRQMADQWRSRLERS
EDGGCLAALAEHYLSPAHRDFPDSGCAAAALAGEISRQDAGVRRSFAAGLEPLLALLDEARLRDGSGPSPEASLALMVGA
LLLARAVPDAGLSQRFLNEARAALRAQGE

Sequences:

>Translated_189_residues
MRYPDTHKAQTRRRIVAMAALRFRAEGLSSVGIANLMADLGLTHGGFYAHFAGKDELVAAACAEALRQMADQWRSRLERS
EDGGCLAALAEHYLSPAHRDFPDSGCAAAALAGEISRQDAGVRRSFAAGLEPLLALLDEARLRDGSGPSPEASLALMVGA
LLLARAVPDAGLSQRFLNEARAALRAQGE
>Mature_189_residues
MRYPDTHKAQTRRRIVAMAALRFRAEGLSSVGIANLMADLGLTHGGFYAHFAGKDELVAAACAEALRQMADQWRSRLERS
EDGGCLAALAEHYLSPAHRDFPDSGCAAAALAGEISRQDAGVRRSFAAGLEPLLALLDEARLRDGSGPSPEASLALMVGA
LLLARAVPDAGLSQRFLNEARAALRAQGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20067; Mature: 20067

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPDTHKAQTRRRIVAMAALRFRAEGLSSVGIANLMADLGLTHGGFYAHFAGKDELVAA
CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
ACAEALRQMADQWRSRLERSEDGGCLAALAEHYLSPAHRDFPDSGCAAAALAGEISRQDA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GVRRSFAAGLEPLLALLDEARLRDGSGPSPEASLALMVGALLLARAVPDAGLSQRFLNEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RAALRAQGE
HHHHHCCCC
>Mature Secondary Structure
MRYPDTHKAQTRRRIVAMAALRFRAEGLSSVGIANLMADLGLTHGGFYAHFAGKDELVAA
CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
ACAEALRQMADQWRSRLERSEDGGCLAALAEHYLSPAHRDFPDSGCAAAALAGEISRQDA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GVRRSFAAGLEPLLALLDEARLRDGSGPSPEASLALMVGALLLARAVPDAGLSQRFLNEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RAALRAQGE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA