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The map label for this gene is yaeJ [C]

Identifier: 33864476

GI number: 33864476

Start: 2338686

End: 2339117

Strand: Direct

Name: yaeJ [C]

Synonym: PMT2212

Alternate gene names: 33864476

Gene position: 2338686-2339117 (Clockwise)

Preceding gene: 33864475

Following gene: 161350039

Centisome position: 97.01

GC content: 44.44

Gene sequence:

>432_bases
ATGGACGATCTAAGAGTTAATTCGCAATTAGTCATCCCATCAGCTGAATTACAATGGCGATTTTCAAGGGCTTCAGGTCC
TGGTGGGCAAAACGTCAATAAGACCAATAGTCGAGTTGAACTGATCTTTGATCTCAACGCAACCTCTGCACTAGGACCTT
TTCGAAAAAAACGCTTATTAAGTCAACTTCAACATCGCTTGGTGGCTGGTTGTATACGTGTGGTTGCAGCGGAAGAACGT
TCGCAATATCAAAACCGTCAGTTAGCCCTTTCGAGACTGGCTTATTTTTTACGAATGGGCTTAGAAGCAGTTCCCAAGAC
ACGCAAACCAACCAAACCCAGTCAAGCAGCAAAGAAACGTCGTCTTCAAGCCAAAAAACTACGCGGCGAATTAAAACGCA
CCCGACAATCCAAACCTTCACTCAATGCCTAA

Upstream 100 bases:

>100_bases
CAATCATGTATTTTAATCATTAACATGCGCCATGCCACTAAGCCCACTTTAATAGAGTCACACTCCTAAAAAATACTTCC
AAGATCTGCGACTAAAGTCA

Downstream 100 bases:

>100_bases
TTAGCATTCAGTCAGCATGAATTGCGTTAATTATTCATGGAAAGATGCACTTCTAAGTACAAAACAATATCCTTCGGACA
GAACAACCAAAAAGGGCTCA

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDDLRVNSQLVIPSAELQWRFSRASGPGGQNVNKTNSRVELIFDLNATSALGPFRKKRLLSQLQHRLVAGCIRVVAAEER
SQYQNRQLALSRLAYFLRMGLEAVPKTRKPTKPSQAAKKRRLQAKKLRGELKRTRQSKPSLNA

Sequences:

>Translated_143_residues
MDDLRVNSQLVIPSAELQWRFSRASGPGGQNVNKTNSRVELIFDLNATSALGPFRKKRLLSQLQHRLVAGCIRVVAAEER
SQYQNRQLALSRLAYFLRMGLEAVPKTRKPTKPSQAAKKRRLQAKKLRGELKRTRQSKPSLNA
>Mature_143_residues
MDDLRVNSQLVIPSAELQWRFSRASGPGGQNVNKTNSRVELIFDLNATSALGPFRKKRLLSQLQHRLVAGCIRVVAAEER
SQYQNRQLALSRLAYFLRMGLEAVPKTRKPTKPSQAAKKRRLQAKKLRGELKRTRQSKPSLNA

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=131, Percent_Identity=39.6946564885496, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16207; Mature: 16207

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLRVNSQLVIPSAELQWRFSRASGPGGQNVNKTNSRVELIFDLNATSALGPFRKKRLL
CCCCCCCCEEECCCHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHCHHHHHHHH
SQLQHRLVAGCIRVVAAEERSQYQNRQLALSRLAYFLRMGLEAVPKTRKPTKPSQAAKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RLQAKKLRGELKRTRQSKPSLNA
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDDLRVNSQLVIPSAELQWRFSRASGPGGQNVNKTNSRVELIFDLNATSALGPFRKKRLL
CCCCCCCCEEECCCHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHCHHHHHHHH
SQLQHRLVAGCIRVVAAEERSQYQNRQLALSRLAYFLRMGLEAVPKTRKPTKPSQAAKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RLQAKKLRGELKRTRQSKPSLNA
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]